WO2007047432A1 - Sulfonamide derivatives as modulators of ppar - Google Patents

Sulfonamide derivatives as modulators of ppar Download PDF

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Publication number
WO2007047432A1
WO2007047432A1 PCT/US2006/040079 US2006040079W WO2007047432A1 WO 2007047432 A1 WO2007047432 A1 WO 2007047432A1 US 2006040079 W US2006040079 W US 2006040079W WO 2007047432 A1 WO2007047432 A1 WO 2007047432A1
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Prior art keywords
optionally substituted
group
compound
recited
hydrogen
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PCT/US2006/040079
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French (fr)
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James W. Malecha
Andrew K. Lindstrom
Sergio G. Duron
Steven P. Govek
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Kalypsys, Inc.
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Publication of WO2007047432A1 publication Critical patent/WO2007047432A1/en

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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D239/00Heterocyclic compounds containing 1,3-diazine or hydrogenated 1,3-diazine rings
    • C07D239/02Heterocyclic compounds containing 1,3-diazine or hydrogenated 1,3-diazine rings not condensed with other rings
    • C07D239/24Heterocyclic compounds containing 1,3-diazine or hydrogenated 1,3-diazine rings not condensed with other rings having three or more double bonds between ring members or between ring members and non-ring members
    • C07D239/28Heterocyclic compounds containing 1,3-diazine or hydrogenated 1,3-diazine rings not condensed with other rings having three or more double bonds between ring members or between ring members and non-ring members with hetero atoms or with carbon atoms having three bonds to hetero atoms with at the most one bond to halogen, directly attached to ring carbon atoms
    • C07D239/32One oxygen, sulfur or nitrogen atom
    • C07D239/42One nitrogen atom
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P3/00Drugs for disorders of the metabolism
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07CACYCLIC OR CARBOCYCLIC COMPOUNDS
    • C07C311/00Amides of sulfonic acids, i.e. compounds having singly-bound oxygen atoms of sulfo groups replaced by nitrogen atoms, not being part of nitro or nitroso groups
    • C07C311/15Sulfonamides having sulfur atoms of sulfonamide groups bound to carbon atoms of six-membered aromatic rings
    • C07C311/16Sulfonamides having sulfur atoms of sulfonamide groups bound to carbon atoms of six-membered aromatic rings having the nitrogen atom of at least one of the sulfonamide groups bound to hydrogen atoms or to an acyclic carbon atom
    • C07C311/17Sulfonamides having sulfur atoms of sulfonamide groups bound to carbon atoms of six-membered aromatic rings having the nitrogen atom of at least one of the sulfonamide groups bound to hydrogen atoms or to an acyclic carbon atom to an acyclic carbon atom of a hydrocarbon radical substituted by singly-bound oxygen atoms
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07CACYCLIC OR CARBOCYCLIC COMPOUNDS
    • C07C311/00Amides of sulfonic acids, i.e. compounds having singly-bound oxygen atoms of sulfo groups replaced by nitrogen atoms, not being part of nitro or nitroso groups
    • C07C311/15Sulfonamides having sulfur atoms of sulfonamide groups bound to carbon atoms of six-membered aromatic rings
    • C07C311/16Sulfonamides having sulfur atoms of sulfonamide groups bound to carbon atoms of six-membered aromatic rings having the nitrogen atom of at least one of the sulfonamide groups bound to hydrogen atoms or to an acyclic carbon atom
    • C07C311/18Sulfonamides having sulfur atoms of sulfonamide groups bound to carbon atoms of six-membered aromatic rings having the nitrogen atom of at least one of the sulfonamide groups bound to hydrogen atoms or to an acyclic carbon atom to an acyclic carbon atom of a hydrocarbon radical substituted by nitrogen atoms, not being part of nitro or nitroso groups
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07CACYCLIC OR CARBOCYCLIC COMPOUNDS
    • C07C2602/00Systems containing two condensed rings
    • C07C2602/02Systems containing two condensed rings the rings having only two atoms in common
    • C07C2602/04One of the condensed rings being a six-membered aromatic ring
    • C07C2602/08One of the condensed rings being a six-membered aromatic ring the other ring being five-membered, e.g. indane

Definitions

  • the present invention relates to novel sulfonyl-substituted bicyclic aryl derivatives and methods for treating various diseases by modulation of nuclear receptor mediated processes using these compounds, and in particular processes mediated by peroxisome proliferator activated receptors (PPARs).
  • PPARs peroxisome proliferator activated receptors
  • Peroxisome proliferators are a structurally diverse group of compounds which, when administered to mammals, elicit dramatic increases in the size and number of hepatic and renal peroxisomes, as well as concomitant increases in the capacity of peroxisomes to metabolize fatty acids via increased expression of the enzymes required for the ⁇ -oxidation cycle (Lazarow and Fujiki, Ann. Rev. Cell Biol. 1 :489-530 (1985); Vamecq and Draye, Ess ⁇ ys Biochem. 24: 1115-225 (1989); and Neiali et el.. Cancer Res.48:5316-5324 (1988)).
  • PPARs Compounds that activate or otherwise interact with one or more of the PPARs have been implicated in the regulation of triglyceride and cholesterol levels in animal models.
  • Compounds included in this group are the fibrate class of hypolipidemic drugs, herbicides, and phthalate plasticizers (Reddy and LaJwani, Criu Rev. Toxicol. 12:1-58 (1983)).
  • Peroxisome proliferation can also be elicited by dietary or physiological factors such as a high-fat diet and cold acclimatization.
  • Biological processes modulated by PPAR are those modulated by receptors, or receptor combinations, which are responsive to the PPAR receptor ligands. These processes include, for example, plasma lipid transport and fatty acid catabolism, regulation of insulin sensitivity and blood glucose levels, which are involved in hypoglycemia/hyperinsulinemia (resulting from, for example, abnormal pancreatic beta cell function, insulin secreting tumors and/or autoimmune hypoglycemia due to autoantibodies to insulin, the insulin receptor, or autoantibodies that are stimulatory to pancreatic beta cells), macrophage differentiation which lead to the formation of atherosclerotic plaques, inflammatory response, carcinogenesis, hyperplasia, and adipocyte differentiation.
  • hypoglycemia/hyperinsulinemia resulting from, for example, abnormal pancreatic beta cell function, insulin secreting tumors and/or autoimmune hypoglycemia due to autoantibodies to insulin, the insulin receptor, or autoantibodies that are stimulatory to pancreatic beta cells
  • macrophage differentiation
  • Subtypes of PPAR include PPAR-alpha, PPAR-delta (also known as NUC! , PPAR-beta and FAAR) and two isoforms of PPAR-gamma. These PPARs can regulate expression of target genes by binding to DNA sequence elements, termed PPAR response elements (PPRE). To date, PPRE's have been identified in the enhancers of a number of genes encoding proteins that regulate lipid metabolism
  • the receptor termed PPAR-alpha (or alternatively, PPAR ⁇ ) was subsequently shown to be activated by a variety of medium end long-chain fatty acids and to stimulate expression of the genes encoding rat acyl-CoA oxidase and hydratase- dehydrogenase (enzymes required for peroxisomal ⁇ -oxidation), as well as rabbit cytochrome P450 4A6, a fatty acid m-hydroxylase (Gottlich et al., Proc. Natl. Acad. Sci. USA 89:4653-4657 (1992); Tugwood et el., EMBO J 1 1:433-439 (1992); Bardot et al., Biochem.
  • PPAR-alpha or alternatively, PPAR ⁇
  • Activators of the nuclear receptor PPAR-gamma have been clinically shown to enhance insulin-action, to reduce serum glucose and to have small but significant effects on reducing serum triglyceride levels in patients with Type 2 diabetes. See, for example, D. E. Kelly et al., Citrr. Opfrt. Endocrinol. Diabetes, 90-96, 5 (2), (1998); M. D. Johnson Ct el., Ann. Pharmacather., 337-348, 32 (3), ( 1997); and M. repelnegger et al., Curr. Ther. Res. , 403-416, 58 (7), (1997).
  • PPAR-delta (or alternatively, PPAR ⁇ ) initially received much less attention than the other PPARs because of its ubiquitous expression and the unavailability of selective ligands.
  • genetic studies and recently developed synthetic PPAR-S agonists have helped reveal its role as a powerful regulator of fatty acid catabolism and energy homeostasis.
  • Studies in adipose tissue and muscle have begun to uncover the metabolic functions of PP AR- ⁇ .
  • Transgenic expression of an activated form of PPAR-S in adipose tissue produces lean mice that are resistant to obesity, hyperlipidemia and tissue steatosis induced genetically or by a high-fat diet The activated receptor induces genes required for fatty acid catabolism and adaptive thermogenesis.
  • PPAR- ⁇ is broadly expressed in the body and has been shown to be a valuable molecular target for treatment of dyslipidemi ⁇ and other diseases.
  • a potent and selective PPAR-delta compound was shown to decrease VLDL and increase HDL in a dose response manner (Oliver et al., Proc. Natl. Acad Sci. U S. /4.98: 5305, 2001 ).
  • PP ⁇ R-modulating drugs have been approved for use in humans.
  • Fenofibrate and gemfibrozil are PP ARa modulators: pioglitazone (Actos, Takeda Pharmaceuticals and EIi Lilly) and rosiglitazone (Avandia, GlaxcoSmithKline) are PPAR ⁇ modulators.
  • pioglitazone Actos, Takeda Pharmaceuticals and EIi Lilly
  • rosiglitazone Avandia, GlaxcoSmithKline
  • PPAR ⁇ modulators are PPAR ⁇ modulators.
  • al of these compounds have liabilities as potential carcinogens, having been demonstrated to have proliferative effects leading to cancers of various types (colon; bladder with PP ⁇ R ⁇ modulators and liver with PPARy modulators) in rodent studies. Therefore, a need exists to identify other modulators of PPARs which lack these liabilities.
  • Selective modulators of PPAR ⁇ may provide an opportunity for such improvements, and may even prove
  • the present invention provides a class of compounds useful as modulators of PPAR, having structural Formula (I)
  • A is selected from the group consisting ofaryl, heteroaryl, cycloalky], and heterocycloalkyl, any of which may be optionally substituted;
  • R 12 is selected from the group consisting of hydrogen, lower alfcyl, lower alkenyl, lower heteroalkyl, and lower alkoxy; R lz rnay join together with a carbon atom in G 1 to form a five to eight- membered carbocycle or het ⁇ rocycle, having structural Formula (II):
  • B is a saturated, partially saturated, or unsaturated hydrocarbon chain, optionally containing one or more heteroatoms, to form an optionally substituted five- to eight-membered carbocycle or heterocycle;
  • T is selected from the group consisting Of-C(O)OH, -C(O)NEb, and tetrazol ⁇ ;
  • G 1 is selected from the group consisting Of-(CR 1 R 2 )-- , -Z(CR 1 R 3 V-, - ⁇ CR'R 2 ), ⁇ -, - (CR 1 R 2 ⁇ (CR 1 RV;
  • R 1 and R 2 are each independently selected from the group consisting of hydrogen, halogen, lower alkyl, lower alkoxy, and lower perhaloalky I, or R 1 and R 2 together may form a cycloalkyl; -;
  • Y is S, -SO 2 N(RV or ' NS-";
  • W is O, S or -NR*; p is 2 to 6; m is 0, 1 or 2;
  • R* and R 1 are each independently selected from the group consisting of hydrogen, halogen, hydroxy, optionally substituted lower alkyl, optionally substituted lower alkoxy, optionally substituted heteroatkyl, optionally substituted cycloalkyl, lowerperbaloalkyl, lower perhaloalkoxy, nitro, cyano, NHj. and -C(O)OR", or R ⁇ and R 4 together may form a cycloalkyl;
  • R 1 ' is selected from the group consisting of hydrogen and optionally substituted lower alkyl
  • R s and R 6 are each independently selected from the group consisting of hydrogen, optionally substituted lower alkyl, optionally substituted lower alkenyl, optionally substituted lower alkynyl, optionally substituted heteroalkyl, optionally substituted aryl, and optionally substituted heteroaryl;
  • R 7 and R 3 are each individually selected from the group consisting of hydrogen, optionally substituted aryl, optionally substituted heteroaryl, optionally substituted cycloalkyl, and optionally substituted cycloheteroalkyl; and wherein said effect is selected from the group consisting of modulation of PPAR ⁇ , upregulation of expression ofGLUT4 in adipose tissue, reduction of expression of NPCl Ll, raising of HDL, lowering of LOLc, shifting of LDL particle size from small dense to normal LDL, inhibition of cholesterol absorption, reduction of triglycerides, decrease of insulin resistance, lowering of blood pressure, promotion of wound healing , reduction of scarring, and treatment of a PPAR ⁇ -mediated disease.
  • the compounds of the invention are selective modulators of PPAR ⁇ .
  • the present invention provides methods of, alone or in combination, raising HDL, lowering LDLc, shifting LDL particle size from small dense to normal LDL, and inhibiting cholesterol absorption, comprising the administration of a therapeutic amount of a compound of the invention.
  • the present invention provides methods for treating metabolic disorders and related conditions, in a human or animal subject in need of such treatment comprising administering to said subject an amount of a compound of formula (1) effective to reduce or prevent said disorders or conditions in the patient.
  • the invention provides for pharmaceutical compositions comprising the compounds of the invention, together with one or more pharmaceutically acceptable diluents or carriers, tn related aspects, the invention provides for pharmaceutical compositions comprising the compounds of the invention and one or more additional agents, for die treatment of metabolic disorders.
  • the compounds of the present invention have structural Formula (1) wherein:
  • T is -CO(O)H
  • R 1 and R 2 are each independently selected from the group consisting of hydrogen, halogen, lower alky I, lower alkoxy, and lower perhaloalkyl;
  • G 2 is -Y(CR 3 R + ) P W(CR 3 R 4 ),,, -;
  • W is O, or -NR 6 ; p is 2;
  • R 3 and R 4 are each hydrogen
  • A is optionally substituted phenyl
  • R 12 is hydrogen
  • R' and R 2 are each independently selected from the group consisting of hydrogen, methyl, ethyl, and propyl;
  • the compounds of the invention wherein said aryl is optionally substituted with one or more of the following: halogen, pcrhaloalkyl, and perhaloalkoxy.
  • the compounds of the invention wherein said perhaloalkoxy is trifluoromethoxy.
  • the compounds of the invention wherein said trifluoromethoxy substitutes said aryl in the para position.
  • Ci is optionally substituted aryl.
  • G 3 is optionally substituted heteroaryl.
  • G 1 Is-N C(R 7 R 8 ).
  • the compounds of the invention wherein at least one R 7 and R s is optionally substituted aryl are optionally substituted aryl.
  • A is optionally substituted phenyl
  • R 12 joins together with a carbon atom in G' to form a five to eight-membered carbocycle or heterocycle;
  • R 1 and R 2 are each independently selected from the group consisting of hydrogen, methyl, ethyl, and propyl.
  • X 1 and X 2 are each independently selected from the group consisting of hydrogen, halogen, hydroxy, optionally substituted lower alky I, optionally substituted cycloaikyl, optionally substituted heteroalkyl, optionally substituted cycloheteroalkyl, optionally substituted lower alkynyl, perhaloalky I, pcrhatoalkoxy, optionally substituted lower alkoxy, nitro, cyano, and NH 2 .
  • X 1 and X 2 are each hydrogen;
  • G 3 is optionally substituted aryl.
  • X i and X 2 are each hydrogen;
  • Q 3 is optionally substituted hetero ⁇ ryl.
  • X i and X 2 are each hydrogen;
  • the compounds of the present invention wherein at least one of R 7 and R a is optionally substituted aryl.
  • the compounds of the present invention wherein both R 7 and R 8 are optionally substituted aryl.
  • W is N; m is 1 ;
  • Xi and Xi are each hydrogen
  • R 3 and R* are hydrogen; and G 3 is optionally substituted aryl.
  • X' and X 2 each independently selected from the group consisting of hydrogen, halogen, hydroxy, optionally substituted lower alkyl, optionally substituted cyclonlkyl, optionally substituted heteroalkyl, optionally substituted cycioheteroalkyl, optionally substituted lower alkynyl, perhaloalkyl, perhafoalkoxy, optionally substituted lower alkoxy, nitro, cyano, and NJH-.
  • X ⁇ andX 2 areeach hydrogen
  • G 3 is optionally substituted aryl.
  • novel compounds disclosed herein can modulate at least one peroxisome proliferator-activated receptor (PPAR) function.
  • PPAR peroxisome proliferator-activated receptor
  • Compounds described herein may be activating both PPAR-delta and PPAR-gamma or PPAR-alpha and PPAR-delta, or all three PPAR subtypes, or selectively activating predominantly PPAR-gamma, PPAR-alpha or PPAR-delta.
  • the present invention discloses a method of modulating at least one peroxisome proliferator- activated receptor (PPAR) function comprising the step of contacting the PP ⁇ R with a compound of Formula I, as described herein.
  • PPAR peroxisome proliferator- activated receptor
  • the change in cell phenotype, cell proliferation, activity of the PPAR, expression of the PPAR or binding of the PPAR with a natural binding partner may be monitored.
  • Such methods may be modes of treatment of disease, biological assays, cellular assays, biochemical assays, or the like.
  • the present invention describes methods of treating a PPAR-mediated disease or metabolic disorder comprising identifying a patient having said disease, and administering a therapeutically effective
  • the disease to be treated by the methods of the present invention is selected from the group consisting of obesity, diabetes, hyperinsuli ⁇ emia, metabolic syndrome X, polycystic ovary syndrome, climacteric, disorders associated with oxidative stress, inflammatory response to tissue injury, pathogenesis of emphysema, ischemia-associated organ injury, doxorubicin-induced cardiac injury, drug-induced hepatotoxicity, atherosclerosis, mid hypertoxic lung injury.
  • the present invention relates to a method of modulating at least one peroxisome proliferator-activated receptor (PPAR) function comprising the step of contacting the PPAR with a compound of Formula I, as described herein.
  • the change in cell phenotype, cell proliferation, activity of the PPAR, or binding of the PPAR with a natural binding partner may be monitored.
  • Such methods may be modes of treatment of disease, biological assays, cellular assays, biochemical assays, or the like.
  • the PPAR may be selected from the group consisting of PPAR ⁇ , PPARS, and PPAR ⁇ .
  • the PPAR is PPARS.
  • the invention also discloses the use of a PPAR-delta modulator compound according to the invention for the manufacture of a medicament for raising HDL, lowering LDLc, shifting LDL particle size from small dense to normal LDL, or inhibiting cholesterol absorption.
  • the invention discloses methods of treatment of a PPAR-delta mediated disease or condition comprising administering a therapeutically effective amount of a compound according the present invention or a pharmaceutically acceptable salt, ester, amide, or prodrug thereof.
  • the present invention discloses: methods for treating Type 2 diabetes, decreasing insulin resistance or lowering blood pressure in a subject; methods for treating atherosclerotic diseases including vascular disease, coronary heart disease, cerebrovascular disease and peripheral vessel disease in a subject; methods for treating cancers including colon, skin, and lung cancers in a subject; and methods for treating inflammatory diseases, including rheumatoid arthritis, asthma, osteoarthritis and autoimmune disease in a subject, ail comprising the administration of a therapeutic amount of a PPAR-delta modulator compound according to the present invention.
  • the invention further discloses compounds of the invention or pharmaceutical compositions thereof for use in the manufacture of a medicament for the prevention or treatment of a disease or condition ameliorated by the modulation of a PPAR-delta.
  • Certain embodiments of the invention include the use of a PPAR-delta modulator compound having structural formula (I) for the manufacture of a medicament for the treatment of: Type 2 diabetes, or for decreasing insulin resistance or lowering blood pressure; atherosclerotic diseases including vascular disease, coronary heart disease, cerebrovascular disease and peripheral vessel disease; cancers including colon, skin, and lung cancers; and inflammatory diseases, including rheumatoid arthritis, asthma, osteoarthritis and autoimmune disease, in a patient in need thereof.
  • Another aspect of the invention are compounds of the invention or pharmaceutical compositions thereof for use in the treatment of disease or condition ameliorated by the modulation of a PPAR-delta wherein said PPAR-delta mediated disease or condition is dyslipidemia, metabolic
  • syndrome X heart failure, hypercholesteremia, cardiovascular disease, type I] diabetes rnellitus, type I diabetes, insulin resistance hyperlipidemia, obesity, anorexia bulimia, inflammation and anorexia nervosa.
  • Another aspect of the invention are compounds, pharmaceutically acceptable prodrugs, pharmaceutically active metabolites, or pharmaceutically acceptable salts thereof and having an ECJO value less than 5 ⁇ M as measured by a functional cell assay.
  • Another aspect of the invention are methods of modulating a peroxisome proliferator- acti vated receptor (PPAR) function comprising contacting said PPAR with a compound of the present invention and monitoring a change in cell phenotype, cell proliferation, activity of said PPAR, or binding of said PPAR with a natural binding partner.
  • PPAR peroxisome proliferator- acti vated receptor
  • Another aspect of the invention are method of modulating a peroxisome proliferator- activated receptor (PPAR) wherein the PPAR is selected from the group consisting of PPAR-alpha, PPAR-delta, and PPAR-gamma.
  • PPAR peroxisome proliferator- activated receptor
  • Another aspect of the invention are methods of treating a disease comprising identifying a patient in need thereof, and administering a therapeutically effective amount of a compound of (he present invention to said patient wherein said disease is selected from the group consisting of obesity, diabetes, hyperinsulinemia, metabolic syndrome X, polycystic ovary syndrome, climacteric, disorders associated with oxidative stress, inflammatory response to tissue injury, pathogenesis of emphysema, ischemia-associated organ injury, doxorubicin-induced cardiac injury, drug-induced hepatotoxicity, atherosclerosis, and hypertonic lung injury.
  • Another aspect of the invention are compounds which modulates a peroxisome proliferator- acti vated receptor (PPAR) function, preferably wherein said PPAR is selected from the group consisting of PPAR ⁇ , PPAR ⁇ , and PPARy.
  • PPAR peroxisome proliferator- acti vated receptor
  • Another aspect of the invention are compounds or composition for use in the treatment of a disease or condition ameliorated by the modulation of a PPAR such as PPAR ⁇ , PPAR ⁇ , and PPARy, wherein the disease or condition is dyslipidemia, metabolic syndrome X, heart failure, hypercholesteremia, cardiovascular disease, type Il diabetes mellitus, type I diabetes, insulin resistance hyperlipidemia, obesity, anorexia bulimia, inflammation and anorexia nervosa.
  • a PPAR such as PPAR ⁇ , PPAR ⁇ , and PPARy
  • the disease or condition is dyslipidemia, metabolic syndrome X, heart failure, hypercholesteremia, cardiovascular disease, type Il diabetes mellitus, type I diabetes, insulin resistance hyperlipidemia, obesity, anorexia bulimia, inflammation and anorexia nervosa.
  • Another aspect of the invention are compounds or compositions according for use in the manufacture of a medicament for the prevention or treatment of disease or condition ameliorated by the modulation of a PPAR such as PPAR ⁇ , PPAR ⁇ , and PPARy.
  • a PPAR such as PPAR ⁇ , PPAR ⁇ , and PPARy.
  • acyl refers to a carbonyl attached to an alkenyl, alkyl, aryl, cycloalkyl, hetero ⁇ ryl, heterocycle, or any other moiety were the atom attached to the carbonyl is carbon.
  • An “acetyl” group refers to a -C(O)CH.-) group.
  • An “alkylcarbonyl” or “alkanoyl” group refers to an olkyl group attached to the parent molecular moiety through a carbonyl group. Examples
  • acyl groups include formyl, alkanoyl and aroyl.
  • alkenyl refers to a straight-chain or branched- chain hydrocarbon radical having one or more double bonds and containing from 2 to 20, preferably 2 to 6, carbon atoms.
  • suitable alkenyl radicals include ethenyl, prope ⁇ yl, 2-methylpropenyl, 1 ,4-butadienyl and the like.
  • alkoxy refers to an alkyl ether radical, wherein the term alkyl is as defined below.
  • suitable alkyl ether radicals include methoxy, ethoxy, n-propoxy, isopnopoxy, n-butoxy, iso-buioxy, sec-butoxy, tert-butoxy, and the like.
  • alkyl refers to a straight-chain or branched- chain alkyl radical containing from I to and including 20, preferably I to 10, and more preferably 1 to 6, carbon atoms. Alkyl groups may be optionally substituted as defined herein. Examples of alkyl radicals include methyl, ethyl, n-propyl, isopropyl, n-butyl, isobutyl, sec-butyl, tert-butyl, pentyl, iso-amyl, hexyl, octyl, noyl end the like.
  • alkylene as used herein, alone or in combination, refers to a saturated aliphatic group derived from a straight or branched chain saturated hydrocarbon attached at two or more positions, such as methylene (-CH 2 -).
  • alkylamino refers to an alkyl group attached to the parent molecular moiety through an amino group. Suitable alkylamino groups may he mono- or dialkylated, forming groups such as, for example, N-methylamino, N-ethylamino, N,N-dimeihylamino, N.N-ethylmethylamino and the like.
  • alkylidene refers to an alkenyl group in which one carbon atom of the carbon-carbon double bond belongs to the moiety to which the alkenyl group is attached.
  • alkytthio refers to an alkyl thioether (K-S-) radical wherein the term alkyl is as defined above and wherein the sulfur may be singly or doubly oxidized.
  • alkyl thioether radicals include methylthio, ethylthio, n-propylthio, isopropylthid, n-butylthio, iso-butylthio, sec-butylthio, tert-butylthio, methanesulfonyl, ethanesulfinyl, and the like.
  • alkynyl refers to a straight-chain or branched chain hydrocarbon radical having one or more triple bonds and containing from 2 to 20, preferably from 2 to 6, more preferably from 2 to 4, carbon atoms.
  • Alkynylen ⁇ refers to a carbon-carbon triple bond attached at two positions such as ethynylene (-C:::C-, -C ⁇ C-).
  • alkynyl radicals include ethynyl, propynyl, hydroxypropynyl, buty ⁇ -l-yl, butyn-2-yl, penty ⁇ -l-yl, 3-methylbutyn-J-yl, hexyn-2-yl, and the like.
  • amino and “carbamoyl,”as used herein, alone or in combination, refer to an amino group as described below attached to the parent molecular moiety through a carbo ⁇ yl group, or vice versa.
  • acylamino as used herein, alone or in combination, embraces an acyl group attached to the parent moiety through an amino group. ⁇ n example of an “acylamino” group is ⁇ cetylamino (CH 3 C(O)NH-).
  • amino refers to — NRR ' , wherein R and R " are independently selected from the group consisting of hydrogen, alkyl, acyl, heteroalkyl, aryl, cyoloalkyl, heteroaryl, and heterocycloalkyl, any of which may themselves be optionally substituted.
  • aryl as used herein, alone or in combination, means a c ⁇ rbocyclic aromatic system containing one, two or three rings wherein such rings may be attached together in a pendent manner or may be fused.
  • aryl embraces aromatic radicals such as benzyl, phenyl, naphthyl, anthracenyl, phenanthryl, indanyl, indenyl, annulenyl, ⁇ zutenyl, tetrahydrotiaphtbyl, and biphenyl.
  • arylalkenylTM or “aralkenyl,” as used herein, alone or in combination, refers to an aryl group attached to the parent molecular moiety through an alke ⁇ yl group.
  • arylalkoxy or “aralkoxy,” as used herein, aJone or in combination, refers to an aryj group attached to the parent molecular moiety through an alkoxy group.
  • arylalkyl or “aralkyl,” as used herein, alone or in combination, refers to an aryl group attached to the parent molecular moiety through an alkyl group.
  • arylalkynyl or “aralkynyl,” as used herein, alone or in combination, refers to an aryl group attached to the parent molecular moiety through an alkynyl group.
  • arylalka ⁇ oyl or “aralkanoyl” or “aroyl,”as used herein, alone or in combination, refers to an acyl radical derived from an aryl-substituted alkanecarboxylic acid such as benzoyl, ⁇ apthoyl, phenylacetyl, 3-phenylpropionyl (hydrocirmamoyl), 4-phenyIbutyryl, (2-naphthyl)acetyl, 4- chlor ⁇ hydrocinnamoyl, and the like.
  • aryloxy refers to an aryl group attached to the parent molecular moiety through an oxy.
  • benzo and "benz,” as used herein, alone or in combination, refer to the divalent radical derived from benzene. Examples include benzothiophene and benzimidazole.
  • carbnmic acid as used herein, alone or in combination, refers to an ester of carbnmic acid (-NHCOO-) which may be attached to the parent molecular moiety from either the nitrogen or acid end, and which may be optionally substituted as defined herein.
  • O-carbamyl refers to a -OC(O)NRR', group-with R and R' as defined herein.
  • N-carbamyl as used herein, alone or in combination, refers to a ROC(O)NR'- group, with R and R' as defined herein.
  • carbonyl when alone includes fortnyl [-C(O)H] and in combination is a -C(O)- group.
  • carboxy refers to -C(O)OH or the corresponding “carboxylate” anion, such as is in a carboxylic acid salt.
  • An "O-carboxy” group refers to ⁇ RC(O)O- group, where R is as defined herein.
  • a “C-carboxy” group refers to a— C(O)OR groups where R is as defined herein.
  • cyano as used herein, alone or in combination, refers to -CN.
  • cycloalkyl refers to a saturated or partially saturated monocyclic, bicyclic or tricyclic alkyl radical wherein each cyclic moiety contains from 3 to 12, preferably five to seven, carbon atom ring members and which may optionally be a benzo fused ring system which is optionally substituted as defined herein.
  • cycloalkyl radicals include cyclopropyl, cyclobutyl, cyclope ⁇ tyl, cyclohexyl, cycioheptyl, octahydronaphthyl, 2,3-dihydro-I H-indenyl, adamantyl and the like.
  • Bicyclic and tricyclic as used herein are intended to include both fused ring systems, such as decahydonapthalene, octahydronaptbalene as well as the multicyclic (mu)ticentered) saturated or partially unsaturated type.
  • the latter type of isomer is exemplified in general by, bicyclo[1,t ,l] ⁇ entane, camphor, ad ⁇ mantane, and bicyclof3.2,l]oct ⁇ ne.
  • esters refers to a carboxy group bridging two moieties linked at carbon atoms.
  • ether refers to an oxy group bridging two moieties linked at carbon atoms.
  • halo or halogen, as used herein, alone or in combination, refers to fluorine, chlorine, bromine, or iodine.
  • haloalkoxy refers to a haloalkyl group attached to the parent molecular moiety through an oxygen atom.
  • haloalkyl refers to an alkyl radical having the meaning as defined above wherein one or more hydrogens are replaced with a halogen. Specifically embraced are monohaloalkyl, dihaloaJkyl and polyhaloalkyl radicals.
  • a monohaloalkyl radical for one example, may have an iodo, bromo, chJoro or fluoro atom within the radical.
  • Dihnlo and poly haloalkyl radicals may have two or more of the same halo atoms or a combination of different halo radicals.
  • h ⁇ loalkyl radicals include fluoromethyl, difluoromethyl, trifluoromethy), chloromethy), dichloromethyl, trichloromethyl, pentafluoroethyl, heptafluoropropyl, difluorochloromethyl, dichlorofluoromelhyl, difluoroethyl, difluoropropyl, dichloroethyl and dichloropropyl.
  • "Haloalkylene” refers to a haloalkyl group attached at two or more positions. Examples include fluoromethylene (-CFH-), difluoromethylene (-CF 2 -), chloromethyiene (-CHC1-) and the like.
  • heteroalkyl refers to a stable straight or branched chain, or cyclic hydrocarbon radical, or combinations thereof, fully saturated or containing from 1 to 3 degrees of unsaturation, consisting of the stated number of carbon atoms and from one to three heteroator ⁇ s selected from the group consisting of O, N, and S, and wherein the nitrogen and sulfur atoms may optionally be oxidized and the nitrogen heteroatom may optionally be quatemizetJ.
  • N and S may be placed at ⁇ y interior position of the heteroalkyl group.
  • Up to two heteroatoms may be consecutive, such as, for example, -CH 2 -NH-OCH3.
  • heteroaryl refers to 3 to 7 membered, preferably 5 to 7 membered, unsaturated heteromonocyclic rings, or fused polycyclic rings in which at least one of the fused rings is unsaturated, wherein at least one atom is selected from the group consisting of O, S, and N.
  • the term also embraces fused polycyclic groups wherein heterocyclic radicals are fused with aryl radicals, wherein heteroaryl radicals are fused with other heteroaryl radicals, or wherein heteroaryl radicals are fused with cycloajkyl radicals.
  • heteroaryl groups include pyrrolyl, pyrroiinyl, imidazolyl, pyrazolyl, pyridyl, pyrimidinyl, pyrazinyl, pyridazinyl, triazolyl, pyronyl, furyl, thienyl, oxazolyl, isoxazolyl, oxadiazolyl, thiazolyl, thiadiazolyl.
  • heterocycloalkyl and, interchangeably, “heterocycle,” as used herein, alone or in combination, each refer to a saturated, partially unsaturated, or fully unsaturated monocyclic, bicyclic, or tricyclic heterocyclic radical containing at least one, preferably I to 4, and more preferably I to 2 heteroatoms as ring members, wherein each said heteroatom may be independently selected from the group consisting of nitrogen, oxygen, and sulfur, and wherein there are preferably 3 to S ring members in each ring, more preferably 3 to 7 ring members in each ring, and most preferably S to 6 ring members in each ring.
  • Heterocycloalkyl and “heterooycle” are intended to include sulfones, sulfoxides, N-o ⁇ ides of tertiary nitrogen ring members, and c ⁇ rbocyclic fused and benzo fused ring systems; additionally, both terms also include systems where a heterocycle ring is fused to an aryl group, as defined herein, or an additional heterocycle group.
  • Heterocycle groups of the invention are exemplified by aziridinyl, azetidinyl, 1,3-benzodioxoJyl, dihydroisoindolyl, dihydrois ⁇ quinolinyl, dihydrocinnoHny), dihydrobenzodioxinyl, dihydro[I,3]oxazolor4,5-b]pyridinyl, benzothiazolyj, dihydroindolyl, dihy-dropyridinyl, 1 ,3-diox ⁇ ny], 1,4- dioxanyl, 1 ,3-dioxolany I, isoi ⁇ dofi ⁇ yl, morpholi ⁇ yl, piperazinyl, pyrrolidinyl, tetrahydropyridinyl, piperidinyl, thiomorpholinyl, and the like.
  • the heterocycle groups may be optionally substituted unless specifically prohibited.
  • hydrozi ⁇ yl refers to two amino groups joined by a single bond, i.e., -N-N-.
  • hydroxyalkyl refers to a hydroxy group attached to the parent molecular moiety through an alkyl group.
  • m the man chain refers to the longest contiguous or adjacent chain of carbon atoms starting at the point of attachment of a group to the compounds of this invention.
  • isocyanato refers to a -NCO group
  • isothiocyanato refers to a -NCS group
  • linear chain of atoms refers to the longest straight chain of atoms independently selected from carbon, nitrogen, oxygen and sulfur.
  • lower means containing from 1 to and including 6 carbon atoms.
  • merc ⁇ ptyl as used herein, alone or m combination, refers to an RS- group, where R is as defined herein.
  • nitro refers to -NO 2 .
  • perhaloalkoxy refers to an alkoxy group where all of the hydrogen atoms are replaced by halogen atoms
  • p ⁇ rhaloslkyl refers to an alkyl group where all of the hydrogen atoms are replaced by halogen atoms.
  • sulfonate refers the -SO 3 H group and its anion as the sulfonic acid is used in salt formation.
  • thia and thio refer to a — S- group or an ether wherein the oxygen is replaced with sulfur.
  • the oxidized derivatives of the thio group namely sulfinyl and sulfo ⁇ yl, are included in the definition of thia and thio.
  • thiol as used herein, alone or in combination, refers to an -SH group.
  • thiocarbonyl when alone includes thioformyl -C(S)H and in combination is a -C(S)- group
  • N-thiocarbamyl refers to an ROC(S)NR'- group, with R and R' as defined herein
  • O-thiocarbamyl refers to a -OC(S)NRR', group with R and R'as defined herein
  • t ⁇ halomethanesulfonamido refers to a XjCS(O) S NR- group with X is a halogen and R as defined herein.
  • trihalomethanesulfonyl refers to a X 3 CS(O)r- group where X is a halogen
  • tnhalomethoxy refers to a X 3 CO- group where X is a halogen
  • t ⁇ substituted silyl refers to a silicone group substituted at its three free valences with groups as listed herein under the definition of substituted amino. Examples include t ⁇ methysilyl, tert-butyldimethylsilyl, lriphenylsilyi and the like.
  • any definition herein may be used in combination with any other definition to describe a composite structural group.
  • the trailing element of any such definition is that which attaches to the parent moiety.
  • the composite group alkylamido would represent an alkyl group attached to the parent molecule through an amido group
  • the term alkoxyalkyt would represent an alkoxy group attached to the parent molecule through an alkyi group
  • the term "optionally substituted” means the anteceding group may be substituted or uns ⁇ bstituted.
  • the substituenls of an "optionally substituted” group may include, without limitation, one or more substiruents independently selected from the following groups or a particular designated set of groups, alone or in combination: lower alkyl, lower alkenyl, loweralkynyl, lower alkanoyl, lower heteroalkyl, lower heterocycloalkyl, lower hftloalkyl, lower haloalkenyl, lower haloalkynyl, lower perhaloalkyl, lower perhaloalkoxy, lower cycloalkyl, phenyl, aryl, aryloxy, lower alkoxy, lower haloalkoxy, oxo, lower acyloxy, carbonyl, carboxyl, lower alkylcarbonyl, lower carboxyester, lower carboxamido, cyano, hydrogen, halogen, hydroxy,
  • fiiranyl, lower carbamate, and lower urea Two substituents may be joined together to form a fused five-, six-, or seven-menbered carbocyclic or heterocyclic ring consisting of zero to three heteroatoms, for example forming methylenedioxy or cthylenedioxy.
  • An optionally substituted group may be unsubstituted (e.g., -CH 2 CH 3 ), fully substituted (e.g., -CF 3 CF 3 ), monosubstituted (e.g., -CH 2 CH 2 F) or substituted at a level anywhere in-between fully substituted and monosubstituted (e.g., -CH 2 CF 3 ).
  • R ox refers to a moiety selected from the group consisting of hydrogen, alkyl, cycloalkyl, heteroalkyl, aryl, heteroaryl and heterocycloalkyl, any of which may be optionally substituted.
  • R. and R' groups should be understood to be optionally substituted as defined herein.
  • every substituent, and every term should be understood to be independent of every other in terms of selection from a group. Should any variable, substituent, or term (e.g. aryl, heterocycle, R, etc.) occur more than one time in a formula or generic structure, its definition at each occurrence is independent of the definition at every other
  • the compounds of the present invention may exist as geometric isomers.
  • the present invention includes all cis, trans, syn, anti,
  • E
  • Z
  • compounds may exist as tautomcrs; all tautomeric isomers are provided by this invention.
  • the compounds of the present invention can exist in unsolvated as well as solvated forms with pharmaceutically acceptable solvents such as water, ethanol, and the like. In general, the solvated forms are considered equivalent to the unsolvated forms for the purposes of the present invention.
  • bonds refers to a covalent linkage between two atoms, or two moieties when lhe atoms joined by the bond are considered to be part of larger substructure.
  • a bond may be single, double, or triple unless otherwise specified.
  • combination therapy means the administration of two or more therapeutic agents to treat a therapeutic condition or disorder described in the present disclosure. Such administration encompasses co-administration of these therapeutic agents in a substantially simultaneous manner, such as in a single capsule having a fixed ratio of active ingredients or in multiple, separate capsules for each active ingredient. In addition, such administration also encompasses use of each type of therapeutic agent in a sequential manner. In either case, the treatment regimen will provide beneficial effects of the drug combination in treating the conditions or disorders described herein.
  • PPAR modulator is used herein to refer Io a compound that exhibits an IC 50 with respect to PPAR activity of no more than about 100 ⁇ M and more typically not more than about 50 .mu.M, as measured in the PPAR assay described generally hereinbelow.
  • ICs 0 is that concentration of inhibitor which reduces the activity of an enzyme (e.g., PPAR) to half-maximal level, Representative compounds of the present invention have been discovered to exhibit inhibitory activity against PPAR.
  • Compounds of the present invention preferably exhibit an ICJ 0 with respect to PPAR of no more than about 10 ⁇ M, more
  • patient means all mammals including humans. Examples of patients include humans, cows, dogs, cats, goats, sheep, pigs, and rabbits.
  • therapeutically effective amount refers to that amount of the compound being administered which will relieve to some extent one or more of the symptoms of the disease, condition or disorder being treated.
  • a therapeutically effective amount refers to that amount which has the effect of (I) reducing the blood glucose levels; (2) normalizing lipids, e.g. triglycerides, low-density lipoprotein; (3) relieving to some extent (or, preferably, eliminating) one or more symptoms associated with the disease, condition or disorder to be treated; and/or (4) raising HDL.
  • an “enhance” or “enhancing” means to increase or prolong either in potency or duration a desired effect.
  • the term “enhancing” refers to the ability to increase or prolong, either in potency or duration, the effect of other therapeutic agents on a system.
  • An “enhancing-effective amount,” as used herein, refers to an amount adequate to enhance the effect of another therapeutic agent in a desired system.
  • amounts effective for this use will depend on the severity and course of the disease, disorder or condition (including, but not limited to, metabolic disorders), previous therapy, the patient's health status and response to the drugs, and the judgment of the treating physician. It is considered well within the skill of the art for one to determine such enfiancing-efFective amounts by routine experimentation.
  • substituent is a group that may be substituted with one or more grou ⁇ (s) individually and independently selected from alkyl, cycloalkyl, aryl, heteroaryl, heleroalicyclic, hydroxy, alkoxy, perhaloalkoxy,( ⁇ referobly perfluoroalkyloxy), mono or dihaloalkoxy, aryloxy, mercapto, ⁇ ikylthio, arylthio, cyano, halo, carbonyl, thiocarbonyl, O-c ⁇ rbamyl, N-carbar ⁇ yl, O-thiocarbamyl, N-thiocarbamyl, C- ⁇ mido, N- ami do, S-sulfonamido, N-sulfonamido, C-carboxy, O-carboxy, isocya ⁇ ato, thi
  • Molecular embodiments of the present invention may possess one or more chir ⁇ l centers and each center may exist in the R or S configuration.
  • the present invention includes all diastcreomeric, enantiomeric, and epimeric forms as well as the appropriate mixtures thereof.
  • Stereoisomers may be obtained, if desired, by methods known in the art as, for example, the separation of stereoisomers by chiral chromatographic columns. Additionally, the compounds of the present invention may exist as geometric
  • the present invention includes all cis, trans, syn, anti,
  • E
  • Z
  • isomers as well as the appropriate mixtures thereof.
  • compounds may exist as tautomers. All tautomersare included within Formula I and are provided by this invention.
  • the compounds of the present invention can exist in unsolvnted as well as solvated forms with pharmaceutically acceptable solvents such as water, ethanol, and the like.
  • the solvated forms are considered equivalent to the unsolv ⁇ ted forms for the purposes of the present invention.
  • the present invention relates to a method of treating a disease comprising identifying a patient in need thereof, and administering a therapeutically effective amount of a compound of Formula I, as described herein, to the patient.
  • PPAR ⁇ The third subtype of PPARs, PPAR ⁇ (PP ⁇ R ⁇ , NUCl), is broadly expressed in the body and has been shown to be a valuable molecular target for treatment of dyslipidemia and other diseases.
  • PPAR ⁇ PPAR ⁇ R ⁇ , NUCl
  • a potent and selective PPAR ⁇ compound was shown to decrease VLOL and increase HDL in a dose response manner (Oliver el al,, Proc, Natl. Acad. Sci. U. S. ⁇ .98: 5305, 200I).
  • the compounds of the invention are useful in the treatment of a disease or condition ameliorated by the modulation of an PPAR-delta.
  • Specific diseases and conditions modulated by PPAR-delta and for which the compounds and compositions are useful include but arc not limited to dyslipidemia, syndrome X, heart failure, hypercholesteremia, cardiovascular disease, type II diabetes mellitus, type I diabetes, insulin resistance hyperlipidemia, obesity, anorexia bulimia, inflammation and anorexia nervosa.
  • Other indications include reduction of scarring and wound healing.
  • the compounds of the invention may also be used (a) for raising H0L in a subject; (b) for treating Type 2 diabetes, decreasing insulin resistance or lowering blood pressure in a subject; (c) for decreasing LDLc in a subject; (d) for shifting LDL particle size from small dense to normal dense LDL in a subject; (e) for reducing cholesterol absorption or increasing cholesterol excretion in a subject; (f) for reducing the expression of NPCl L I in a subject; (g) for treating atherosclerotic diseases including vascular disease, coronary heart disease, cerebrovascular disease and peripheral vessel disease in a subject; and (h) for treating inflammatory diseases, including rheumatoid arthritis, asthma, osteoarthritis and autoimmune disease in a subject.
  • the compounds of the invention may also be used for treating, ameliorating, or preventing a disease or condition selected from the group consisting of obesity, diabetes, hyperinsulinemia, metabolic syndrome X, polycystic ovary syndrome, climacteric, disorders associated with oxidative stress, inflammatory response to tissue injury, pathogenesis of emphysema, ischemia-associated organ injury.
  • a disease or condition selected from the group consisting of obesity, diabetes, hyperinsulinemia, metabolic syndrome X, polycystic ovary syndrome, climacteric, disorders associated with oxidative stress, inflammatory response to tissue injury, pathogenesis of emphysema, ischemia-associated organ injury.
  • doxorubicin-induced cardiac injury drug-induced hepatotoxicity, atherosclerosis, and hyp ⁇ rtoxic lung injury.
  • compositions containing the compound(s) described herein can be administered for prophylactic and/or therapeutic treatments.
  • the compositions are administered to a patient already suffering from a disease, condition or disorder mediated, modulated or involving the PPARs, including but not limited to metabolic diseases, conditions, or disorders, as described above, in an amount sufficient to cure or at least partially arrest the symptoms of the disease, disorder or condition.
  • Amounts effective for this use will depend on the severity and course of the disease, disorder or condition, previous therapy, the patient's health status and response to the drugs, and the judgment of the treating physician. It is considered well within the skill of the art for one to determine such therapeutically effective amounts by routine experimentation (e.g., a dose escalation clinical trial).
  • compositions containing the compounds described herein are administered to a patient susceptible to or otherwise at risk of a particular disease, disorder or condition mediated, modulated or involving the PPARs, including but not limited to metabolic diseases, conditions, or disorders, as described above.
  • a particular disease, disorder or condition mediated, modulated or involving the PPARs including but not limited to metabolic diseases, conditions, or disorders, as described above.
  • Such an amount is defined to be a "prophylactically effective amount or dose.”
  • the precise amounts also depend on the patient's state of health, weight, and the like. It is considered well within the skill of the art for one to determine such prophylactically effective amounts by routine experimentation (e.g., a dose escalation clinical trial).
  • a maintenance dose is administered if necessary. Subsequently, the dosage or the frequency of administration, or both, can be reduced, as a function of the symptoms, to a level at which the improved disease, disorder or condition is retained. When the symptoms have been alleviated to the desired level, treatment can cease. Patients can, however, require intermittent treatment on a long-term basis upon any recurrence of symptoms.
  • the amount of a given agent that will correspond to such an amount will vary depending upon factors such as the particular compound, disease condition and its severity, the identity (e.g., weight) of the subject or host in need of treatment, but can nevertheless be routinely determined in a manner known in the art according to the particular circumstances surrounding the case, including, e.g., the specific agent being administered, the route of administration, the condition being treated, and the subject or host being treated.
  • doses employed for adult human treatment will typically be in the range of 0.02-5000 mg per day, preferably 1-1500 mg per day.
  • the desired dose may conveniently be presented in a single dose or as divided doses administered at appropriate intervals, for example as two, three, four or more sub- doses per day.
  • therapeutic effectiveness of one of the compounds described herein may be enhanced by administration of an adjuvant (i.e., by itself the adjuvant may only have minimal therapeutic benefit, but in combination with another therapeutic agent, the overall therapeutic benefit to the patient is enhanced).
  • the benefit of experienced by a patient may be increased by administering one of the compounds described herein with another therapeutic agent (which also includes a therapeutic regimen) that also has therapeutic benefit.
  • increased therapeutic benefit may result by also providing the patient with another therapeutic agent for diabetes.
  • the overall benefit experienced by the patient may simply be additive of the two therapeutic agents or the patient may experience a synergistic benefit.
  • statin and/or other lipid lowering drugs for example MTP inhibitors and LDLR upregulators
  • antidiabetic agents e.g. metformin, sulfonylureas, or PPAR-gamma, PPAR-alph ⁇ and PPAR-alpha/gamma modulators (for example thiazolidinediones such as e.g. Pioglitazone and Kosiglitazone)
  • antihypertensive agents such as angiotensin antagonists, e.g., telmisartan, calcium channel antagonists, e.g. lacidtpine and ACE inhibitors, e.g., enalapril.
  • the multiple therapeutic agents may be administered in any order or even simultaneously. If simultaneously, the multiple therapeutic agents may be provided in a single, unified form, or in multiple forms (by way of example only, either as a single pill or as two separate pills). One of the therapeutic agents may be given in multiple doses, or both may be given as multiple doses. If not simultaneous, the timing between the multiple doses may vary from more than zero weeks to less than four weeks.
  • Suitable routes of administration may, for example, include oral, rectal, transmucosal, pulmonary, ophthalmic or intestinal administration; parenteral delivery, including intramuscular, subcutaneous, intravenous, intramedullary injections, as well as intrathecal, direct intraventricular, intraperitoneal, intranasal, or intraocular injections.
  • compositions of the present invention may be manufactured in a manner that is itself known, e.g., by means of conventional mixing, dissolving, granulating, dragee-making, levigating, emulsifying, encapsulating, entrapping or compression processes.
  • compositions for use in accordance with the present invention thus may be formulated in conventional manner using one or more physiologically acceptable carriers comprising exctpients and auxiliaries which facilitate processing of the active compounds into preparations which can
  • the agents of the invention may be formulated in aqueous solutions, preferably in physiologically compatible buffers such as HanJ ⁇ s's solution. Ringer's solution, or physiological saline buffer.
  • physiologically compatible buffers such as HanJ ⁇ s's solution. Ringer's solution, or physiological saline buffer.
  • penetrants appropriate to the barrier to be permeated are used in the formulation. Such penetrants are generally known in the art.
  • the agents of the invention may be formulated in aqueous or nonaqueous solutions, preferably with physiologically compatible buffers or excipients. Such excipients are generally known in the art.
  • the compounds can be formulated readily by combining the active compounds with pharmaceutically acceptable carriers or excipients well known in the art.
  • Such carriers enable the compounds of the invention to be formulated as tablets, powders, pills, dragees, capsules, liquids, gels, syrups, elixirs, slurries, suspensions and the like, for oral ingestion by a patient to be treated.
  • Pharmaceutical preparations for oral use can be obtained by mixing one or more solid excipient with one or more compound of the invention, optionally grinding the resulting mixture, and processing the mixture of granules, after adding suitable auxiliaries, if desired, to obtain tablets or dragee cores.
  • Suitable excipients are, in particular, fillers such as sugars, including lactose, sucrose, mannitol, or sorbitol; cellulose preparations such as: for example, maize starch, wheat starch, rice starch, potato starch, gelatin, gum tragacanth, methylcellulose, macrocrystalline cellulose, hydroxypropylmethylcellulose, sodium carboxymethy I cellulose; or others such as: polyvinylpyrrolidone (PVP or povidone) or calcium phosphate.
  • disintegrating agents may be added, such as the cross-linked croscarmellose sodium, polyvinyl pyrrolidone, agar, or alginic acid or a salt thereof such as sodium alginate.
  • Dragee cores are provided with suitable coatings.
  • suitable coatings may be used, which may optionally contain gum arabic, talc, polyvinyl pyrrolidone, carbopol gel, polyethylene glycol, and/or titanium dioxide, lacquer solutions, and suitable organic solvents or solvent mixtures.
  • Dyestuffs or pigments may be added to the tablets or dragee coalings for identification or to characterize different combinations of active compound doses.
  • compositions which can be used orally include push-fit capsules made of gelatin, as well as soft, sealed capsules made of gelatin and a plasticizer, such as glycerol or sorbitol.
  • the push-fit capsules can contain the active ingredients in admixture with filler such as lactose, binders such as starches, and/or lubricants such as talc or magnesium stearate and, optionally, stabilizers.
  • the active compounds may be dissolved or suspended in suitable liquids, such as fatty oils, liquid paraffin, or liquid polyethylene glycols. Jn addition, stabilizers may be added. All formulations for oral administration should be in dosages suitable for such administration.
  • compositions may take the form of tablets, lozenges, or gels formulated in conventional manner.
  • the compounds for use according to the present invention are conveniently delivered in the form of an aerosol spray presentation from pressurized packs or a nebuliser, with the use of a suitable propellant, e.g., dichlorodifluoromethane, trichlorofluoromethane, dichlorotetmfluoroethane, carbon dioxide or other suitable gas.
  • a suitable propellant e.g., dichlorodifluoromethane, trichlorofluoromethane, dichlorotetmfluoroethane, carbon dioxide or other suitable gas.
  • a suitable propellant e.g., dichlorodifluoromethane, trichlorofluoromethane, dichlorotetmfluoroethane, carbon dioxide or other suitable gas.
  • a suitable propellant e.g., dichlorodifluoromethane, trichlorofluoromethane, dichlorotetmfluoroethane
  • the compounds may be formulated for parenteral administration by injection, e.g., by bolus injection or continuous infusion.
  • Formulations for injection may be presented in unit dosage form, e.g., in ampoules or in multi-dose containers, with an added preservative.
  • the compositions may take such forms as suspensions, solutions or emulsions in oily or aqueous vehicles, and may contain formulatory agents such as suspending, stabilizing and/or dispersing agents.
  • compositions for parenteral administration include aqueous solutions of the active compounds in water-soluble form. Additionally, suspensions of the active compounds may be prepared as appropriate oily injection suspensions. Suitable lipophilic solvents or vehicles include fatty oils such as sesame oil, or synthetic fatty acid esters, such as ethyl oleate or triglycerides, or liposomes. Aqueous injection suspensions may contain substances which increase the viscosity of the suspension, such as sodium carboxymethy I cellulose, sorbitol, or dextran. Optionally, the suspension may also contain suitable stabilisers or agents which increase the solubility of the compounds to allow for the preparation of highly concentrated solutions.
  • the active ingredient may be in powder form for constitution with a suitable vehicle, e.g., sterile pyrogen- free water, before use.
  • a suitable vehicle e.g., sterile pyrogen- free water
  • the compounds may also be formulated in rectal compositions such as suppositories or retention enemas, e.g. , containing conventional suppository bases such as cocoa butter or other glycerides.
  • the compounds may also be formulated as a depot preparation. Such long acting formulations may be administered by implantation (for example subcutaneously or intramuscularly) or by intramuscular injection.
  • the compounds may be formulated with suitable polymeric or hydrophobic materials (for example as an emulsion in an acceptable oil) or ion exchange resins, or as sparingly soluble derivatives, for example, as a sparingly soluble salt.
  • a pharmaceutical carrier for the hydrophobic compounds of the invention is a cosolve ⁇ t system comprising benzyl alcohol, a nonpolar surfactant, a water-miscible organic polymer, and an aqueous phase.
  • the cosolvent system may be a 10% ethanol, 10% polyethylene glycol 300, 10% polyethylene glycol 40 castor oil (PEG-40 castor oil) with 70% aqueous solution.
  • This cosolvent system dissolves hydrophobic compounds well, and itself produces low toxicity upon systemic administration.
  • the proportions of a cosolvent system may be varied considerably without destroying its solubility and toxicity characteristics.
  • the identity of the cosolvent components may be varied: for example, other
  • low-toxicity nonpolar surfactants may be used instead of PEG-40 castor oil, the fraction size of polyethylene glycol 300 may be varied; other biocompatible polymers may replace polyethylene glycol, e g., polyvinyl pyrrolidone; and other sugars or polysaccharides maybe included in the aqueous solution.
  • hydrophobic pharmaceutical compounds may be employed.
  • Liposomes and emutsions are well known examples of delivery vehicles or carriers for hydrophobic drugs.
  • Certain organic solvents such as N-methylpyrrolidone also may be employed, although usually at the cost of greater toxicity.
  • the compounds may be delivered using a sustained-release system, such as semipermeable matrices of solid hydrophobic polymers containing the therapeutic agent.
  • sustained-release materials have been established and are well known by those skilled in the art. Sustained-release capsules may, depending on their chemical nature, release the compounds for a few weeks up to over 100 days.
  • additional strategies for protein stabilization may be employed.
  • Salts useful with the compounds of the present invention include, without limitation, calcium acetate, hydrochloric acid, phosphoric acid, sulfuric acid, sodium hydroxide, potassium hydroxide, magnesium acetate, and p-toluenesulfonic acid salts.
  • the salts can be prepared by contacting the compounds of the invention with an appropriate acid, either neat or in a suitable inert solvent, to yield the salt fomi3 of the invention.
  • the reaction sol ution was stirred at 150 0 C for 24h.
  • the solution was cooled to room temperature, diluted with water (20 mL) and extracted from ethyl acetate (1 x 10 mL).
  • the organic solution was dried (Na 2 SO 4 ) and concentrated in vacuo.
  • the residue was purified by silica gel
  • N'-(5-EfIiyl-pyrimidii ⁇ -2-yl)-N'-(4-(ri ⁇ uoromethoxy-benzyl)-efha ⁇ e-I ⁇ -diamine To a solution of 20% trifluoroacetic acid (2 mL) in methylene chloride (10 mL) was added ⁇ 2-[(5-ethyl-pyrimidin-2-yl)- ⁇ 4- trifluoromethoxy-benzyl-amino]-ethyl ⁇ -carbamic acid tert-butyl ester (100 mg, 0.28 mmo!). The reaction solution was stirred at room temperature for 3h.
  • J2-(4-TrinuorDinethoxy-be ⁇ zylami ⁇ o)-ethyl]-carbamic acid tcrt-butyl ester To a solution of 4- (trifluoromethc»ty)-benzaldehyde (237 mg, 1.25 mmol) in methylene chloride (30 mL) was added N-(2- aminoethyl)carbamic acid tert-butyl ester (200 mg, 1.25 mmol). After 1 h sodium triacetoxy borohydride (527 mg, 2.50 mmol) was added and the reaction mixture was stirred at room temperature for 4h.
  • ⁇ -Pentyl-N'-(4-trifluoromethoxy-bet ⁇ zyl)-ethane-l,2-diamine A solution of f 2-[pemyl-(4- trifluoromethoxy-benzyl)-amino.]-ethyl ⁇ -carbamic acid tert-butyJ ester ( 130 mg, 0.32 mmol) and 20% trifluoroacetic acid (2 mL) in dichloromethane (10 mJL) was stirred at room temperature for 3h. The reaction mixture was concentrated in vacuo, diluted with ethyl acetate and extracted with IN NaOH.
  • Step 3 o Thaodosia SimpWnB Page 38 of SS 2007-01-1300:21:39 (GMT) From: LaV ⁇ rn Hall
  • Methyl 4-sulfamoyl-2-3-dihydro-1H-indene-2-CBrboxylate Ammonia (3.5 mL, 2M in methanol, 7 mmol) was added to a solution of methyl 4-(chlorosulfonyl)-2,3-dihydro-lH-indene-2-carboxylate (825 mg, 3 mmol) and dichloromethane (15 mL) at room temperature.
  • Example I Step 4. 1 H NMR (400 MHz, DMSO-d6): ⁇ 12.81 (s. 1 H), 7.96 (t, 1 H), 7.76 (d, 1 H), 7.60 (d, 1H), 7.47 (d, 1H), 7.33 (t, lH), 6.52 (d, I H), 4.03 (m, 2H), 3.56-3.26 (m, 3H), 3.16 (m, 4H), 2.57 (s, 3H),
  • Methyl 5-(N-methylsulfamoyl)-2,3-dilrydro-1H-indene-2-carboxylate Methylamine (9 mL, 2M in THF, 18 mmol) was added to a solution of methyl 5-(chlorosulfonyl)-2,3-dihydro-1H-indene-2-carboxylate (1..6 g, 5.8 mmol) and dichlorometh ⁇ n ⁇ (20 mL) at room temperature.
  • tert-Butyl 2-(l,3-dioxoist>indoJi ⁇ -2-yloxy)ethyl(mr ⁇ hyl)carbamate 2-(Methylamino)ethanol (10.0 g, 133.1 mmol), triethylamine (55 mL, 394.6 mmol), and BoC 2 O (18 mL, 78.4 mmol) were mixed in DMF (50 mL). The reaction was stirred at room temperature for 1 h then dry loaded on SiO. and purified by flash chromatography to afford tert-bulyl 2-hydroxyethyl(methyl)carbamate (10.85 g).
  • tert-Butyl 2- hydroxyethyl(methyl)carbamate (10.85 g, 61.9 mmol) was then dissolved in THF (500 mL). To this solution was then added triphenylphosphine (18.20 g, 69.4 mmol), ⁇ /-hydroxyphthalamide (12.13 g, 74.4 mmol) and di-tert-butyl azodic ⁇ rboxylate (19.50 g, 84.7 mmol) at 0 "C.
  • tert-Butyl-2-(bis(4-(tri ⁇ uoromethy0phenyl)methyle ⁇ eaniinooxy)e «hyl(r ⁇ ethyl) carbamate Hydrazine monohydrate (240 ⁇ L, 4.9 mmol) was added to a solution of tert-butyl-2-(1,3- dioxoisoindolin-2-yloxy)etbyl(methyl)carbamate (1.0 g, 3.1 mmol) in EtOH (15 mL) at room temperature. When the deprotection was complete by TLC, the mixture was concentrated to afford an off-white solid which was then extracted with diethyl ether.
  • Compounds may be screened for functional potency in transient t ⁇ msfection assays in CV-I cells for their ability to activate the PPAR subtypes (transactiv ⁇ tion assay).
  • transactiv ⁇ tion assay A previously established chimeric receptor system was utilized to allow comparison of the relative transcriptional activity of the receptor subtypes on the same synthetic response element and to prevent endogenous receptor activation from complicating the interpretation of results. See, for example, Lehmann, J. M.; Moore, L. B.; Smith-Oliver, T. A; Wilkinson, W.O.; Willson, T. M.; Kliewer, S.
  • An antidiabetic thiazolidinedione is a high affinity ligand for peroxisome proliferator-activated receptor S (PP ARS), J. Biol. Chem., 1995, 270, 12953-6.
  • the ligand binding domains for murine end human PP ⁇ R-alpha, PPAR-gomma, and PPAR-delta are each fused to the yeast transcription factor GAL4 DNA binding domain.
  • CV-I cells were transiently transfected with expression vectors for the respective PPAR chimera along with a reporter construct containing four or five copies of the GAL4 DNA binding site driving expression of luciferase.
  • the cells are replated into multi-well assay plates and the media is exchanged to phenol-red free DME medium supplemented with 5% delipidated calf serum. 4 hours after replating, cells were treated with either compounds or I %
  • DMSO for 20-24 hours. Luciferase activity was then assayed with Britelite (Perkin Elmer ⁇ following the manufacturer's protocol and measured with either the Perkin Elmer Viewlux or Molecular Devices Acquest (see, for example, Kliewer, S. A., et. al. Cell 1995, 83, 813-819). Rosiglitazone is used as a positive control in the PPAR ⁇ assay, Wy ⁇ l4643 and GW7647 is used as a positive control in the PPAR ⁇ assay. GW50I5I6 is used as the positive control in the PPAR ⁇ assay.
  • Examples I -20 were assayed to measure their biological activity with respect to their efficacy for modulating PPAR-alpha, PPAR-gamma, and PPAR-ddta.
  • EC 50 values arc set forth below in Table I .

Abstract

Compounds as modulators of peroxisome proliferator activated receptors, pharmaceutical compositions comprising the same, and methods of treating disease using the same are disclosed.

Description

o: Theodosla SimpWns Page 4 of 55 2007-01-1300:21:39 (GMT) From: LaVern Hall
Attorney Docket No. K0O91-4O1-PC
SULFONAMIDE DERIVATIVES AS MODULATORS OP PPAR
CROSS REFERENCE TO RELATED APPUCATtQN
This application claims the benefit of priority of U.S. provisional application Serial No. 60/726,402, filed on October 12, 2005, the disclosure of which is hereby incorporated by reference as if written herein in its entirety.
FIELD OF THE INVENTION
The present invention relates to novel sulfonyl-substituted bicyclic aryl derivatives and methods for treating various diseases by modulation of nuclear receptor mediated processes using these compounds, and in particular processes mediated by peroxisome proliferator activated receptors (PPARs).
BACKGROUND OF THE INVENTION
Peroxisome proliferators are a structurally diverse group of compounds which, when administered to mammals, elicit dramatic increases in the size and number of hepatic and renal peroxisomes, as well as concomitant increases in the capacity of peroxisomes to metabolize fatty acids via increased expression of the enzymes required for the β-oxidation cycle (Lazarow and Fujiki, Ann. Rev. Cell Biol. 1 :489-530 (1985); Vamecq and Draye, Essμys Biochem. 24: 1115-225 (1989); and Neiali et el.. Cancer Res.48:5316-5324 (1988)). Compounds that activate or otherwise interact with one or more of the PPARs have been implicated in the regulation of triglyceride and cholesterol levels in animal models. Compounds included in this group are the fibrate class of hypolipidemic drugs, herbicides, and phthalate plasticizers (Reddy and LaJwani, Criu Rev. Toxicol. 12:1-58 (1983)). Peroxisome proliferation can also be elicited by dietary or physiological factors such as a high-fat diet and cold acclimatization.
Biological processes modulated by PPAR are those modulated by receptors, or receptor combinations, which are responsive to the PPAR receptor ligands. These processes include, for example, plasma lipid transport and fatty acid catabolism, regulation of insulin sensitivity and blood glucose levels, which are involved in hypoglycemia/hyperinsulinemia (resulting from, for example, abnormal pancreatic beta cell function, insulin secreting tumors and/or autoimmune hypoglycemia due to autoantibodies to insulin, the insulin receptor, or autoantibodies that are stimulatory to pancreatic beta cells), macrophage differentiation which lead to the formation of atherosclerotic plaques, inflammatory response, carcinogenesis, hyperplasia, and adipocyte differentiation.
Subtypes of PPAR include PPAR-alpha, PPAR-delta (also known as NUC! , PPAR-beta and FAAR) and two isoforms of PPAR-gamma. These PPARs can regulate expression of target genes by binding to DNA sequence elements, termed PPAR response elements (PPRE). To date, PPRE's have been identified in the enhancers of a number of genes encoding proteins that regulate lipid metabolism
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suggesting that PPARs play a pivotal role in the adipogenic signaling cascade and lipid homeostasis (H. Keller and W. Wahli, Trends Endoodn, Met. 291-296, 4 (1993)).
Insight into (he mechanism whereby peroxisome proliferators exert their pleiotropic effects was provided by the identification of a member of the nuclear hormone receptor superfamily activated by these chemicals (Isseman and Green, Nature 347-645-650 (1990)). The receptor, termed PPAR-alpha (or alternatively, PPARα), was subsequently shown to be activated by a variety of medium end long-chain fatty acids and to stimulate expression of the genes encoding rat acyl-CoA oxidase and hydratase- dehydrogenase (enzymes required for peroxisomal β-oxidation), as well as rabbit cytochrome P450 4A6, a fatty acid m-hydroxylase (Gottlicher et al., Proc. Natl. Acad. Sci. USA 89:4653-4657 (1992); Tugwood et el., EMBO J 1 1:433-439 (1992); Bardot et al., Biochem. Btophys. Res. Comm. 192:37-45 (1993); Muerhoff et al., J Biol. Chem. 267:19051-19053 (1992); and Marcus et al., Proc. Natl. Acad Sci. USA 90(12):S723-5727 (1993).
Activators of the nuclear receptor PPAR-gamma (or alternatively, PPΛRγ), for example trαglitazone, have been clinically shown to enhance insulin-action, to reduce serum glucose and to have small but significant effects on reducing serum triglyceride levels in patients with Type 2 diabetes. See, for example, D. E. Kelly et al., Citrr. Opfrt. Endocrinol. Diabetes, 90-96, 5 (2), (1998); M. D. Johnson Ct el., Ann. Pharmacather., 337-348, 32 (3), ( 1997); and M. Leutenegger et al., Curr. Ther. Res. , 403-416, 58 (7), (1997).
PPAR-delta (or alternatively, PPARδ) initially received much less attention than the other PPARs because of its ubiquitous expression and the unavailability of selective ligands. However, genetic studies and recently developed synthetic PPAR-S agonists have helped reveal its role as a powerful regulator of fatty acid catabolism and energy homeostasis. Studies in adipose tissue and muscle have begun to uncover the metabolic functions of PP AR-δ. Transgenic expression of an activated form of PPAR-S in adipose tissue produces lean mice that are resistant to obesity, hyperlipidemia and tissue steatosis induced genetically or by a high-fat diet The activated receptor induces genes required for fatty acid catabolism and adaptive thermogenesis. Interestingly, the transcription of PPAR-γ target genes for lipid storage and lipogenesis remain unchanged. In parallel, PPAR-S-deflcient mice challenged with a high-fat diet show reduced energy uncoupling and are prone to obesity- Together, these data identify PPAR-δ as a key regulator of fat-bum ing, a role that opposes the fat-storing function of PPAR-y. Thus, despite their close evolutionary and structural kinship, PPAR-y and PPAR-δ regulate distinct genetic networks. In skeletal muscle, PPAR-δ likewise upregulates fatty oxidation and energy expenditure, to a far greater extent than does the lesser-expressed PPAR-α. (Evans RM et al 2004 Nature Med 1-7, 10 (4), 2004)
PPAR-δ is broadly expressed in the body and has been shown to be a valuable molecular target for treatment of dyslipidemiα and other diseases. For example, in a recent study in insulin-resistant obese rhesus monkeys, a potent and selective PPAR-delta compound was shown to decrease VLDL and increase HDL in a dose response manner (Oliver et al., Proc. Natl. Acad Sci. U S. /4.98: 5305, 2001 ).
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Attorney Docket No. K009I-40I-PC
Because there are three isofbrms of PPAR and all of them have been shown to play important roles in energy homeostasis and other important biological processes in human body and have been shown to be important molecular targets for treatment of metabolic and other diseases (see Willsoπ, et al. i. Med. Chem.43: 527-550 (2000)), it is desired in the art to identify compounds which are capable of interacting with multiple PPAR isoforms or compounds which are capable of selectively interacting with only one of the PPAR isoforms, preferably PPARδ. Such compounds would find a wide variety of uses, such as, for example, in the treatment or prevention of obesity, for the treatment or prevention of diabetes, dyslipidemia, metabolic syndrome X and other uses.
Several PPΛR-modulating drugs have been approved for use in humans. Fenofibrate and gemfibrozil are PP ARa modulators: pioglitazone (Actos, Takeda Pharmaceuticals and EIi Lilly) and rosiglitazone (Avandia, GlaxcoSmithKline) are PPARγ modulators. However, al) of these compounds have liabilities as potential carcinogens, having been demonstrated to have proliferative effects leading to cancers of various types (colon; bladder with PPΛRα modulators and liver with PPARy modulators) in rodent studies. Therefore, a need exists to identify other modulators of PPARs which lack these liabilities. Selective modulators of PPARδ may provide an opportunity for such improvements, and may even prove useful in the treatment of cancers, including colon, skin, and lung cancers.
SυMMARY OF THE [NVENTJON
The present invention provides a class of compounds useful as modulators of PPAR, having structural Formula (I)
Figure imgf000004_0001
wherein:
A is selected from the group consisting ofaryl, heteroaryl, cycloalky], and heterocycloalkyl, any of which may be optionally substituted;
R12 is selected from the group consisting of hydrogen, lower alfcyl, lower alkenyl, lower heteroalkyl, and lower alkoxy; Rlzrnay join together with a carbon atom in G1 to form a five to eight- membered carbocycle or hetβrocycle, having structural Formula (II):
Figure imgf000004_0002
B is a saturated, partially saturated, or unsaturated hydrocarbon chain, optionally containing one or more heteroatoms, to form an optionally substituted five- to eight-membered carbocycle or heterocycle;
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Attorney Docket No. K0091-401-PC
T is selected from the group consisting Of-C(O)OH, -C(O)NEb, and tetrazolβ;
G1 is selected from the group consisting Of-(CR1R2)-- , -Z(CR1R3V-, -{CR'R2),^-, - (CR1R2^(CR1 RV;
Z )S O1 S1 OrNR*1; n is 1 to 4; r and s are 0 to 2;
R1 and R2 are each independently selected from the group consisting of hydrogen, halogen, lower alkyl, lower alkoxy, and lower perhaloalky I, or R1 and R2 together may form a cycloalkyl;
Figure imgf000005_0001
-;
Y is S, -SO2N(RV or 'NS-";
W is O, S or -NR*; p is 2 to 6; m is 0, 1 or 2;
R* and R1 are each independently selected from the group consisting of hydrogen, halogen, hydroxy, optionally substituted lower alkyl, optionally substituted lower alkoxy, optionally substituted heteroatkyl, optionally substituted cycloalkyl, lowerperbaloalkyl, lower perhaloalkoxy, nitro, cyano, NHj. and -C(O)OR", or Rα and R4 together may form a cycloalkyl;
R1 ' is selected from the group consisting of hydrogen and optionally substituted lower alkyl;
Rs and R6 are each independently selected from the group consisting of hydrogen, optionally substituted lower alkyl, optionally substituted lower alkenyl, optionally substituted lower alkynyl, optionally substituted heteroalkyl, optionally substituted aryl, and optionally substituted heteroaryl;
G3 is selected from the group consisting of hydrogen, optionally substituted aryl, optionally substituted heteroaryl, optionally substituted cycloalkyl, optionally substituted cycloheteroalkyl, and -N=C(R7R8);
R7 and R3 are each individually selected from the group consisting of hydrogen, optionally substituted aryl, optionally substituted heteroaryl, optionally substituted cycloalkyl, and optionally substituted cycloheteroalkyl; and wherein said effect is selected from the group consisting of modulation of PPARδ, upregulation of expression ofGLUT4 in adipose tissue, reduction of expression of NPCl Ll, raising of HDL, lowering of LOLc, shifting of LDL particle size from small dense to normal LDL, inhibition of cholesterol absorption, reduction of triglycerides, decrease of insulin resistance, lowering of blood pressure, promotion of wound healing , reduction of scarring, and treatment of a PPARδ-mediated disease.
In preferred embodiments, the compounds of the invention are selective modulators of PPARδ.
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Attorney Docket No. K.0091-401-PC
In other aspects, the present invention provides methods of, alone or in combination, raising HDL, lowering LDLc, shifting LDL particle size from small dense to normal LDL, and inhibiting cholesterol absorption, comprising the administration of a therapeutic amount of a compound of the invention.
In other aspects, the present invention provides methods for treating metabolic disorders and related conditions, in a human or animal subject in need of such treatment comprising administering to said subject an amount of a compound of formula (1) effective to reduce or prevent said disorders or conditions in the patient.
In other aspects, the invention provides for pharmaceutical compositions comprising the compounds of the invention, together with one or more pharmaceutically acceptable diluents or carriers, tn related aspects, the invention provides for pharmaceutical compositions comprising the compounds of the invention and one or more additional agents, for die treatment of metabolic disorders.
DETAILED DESCRIPTION OF THE INVENTION
In certain embodiments, the compounds of the present invention have structural Formula (1) wherein:
T is -CO(O)H;
Figure imgf000006_0001
R1 and R2 are each independently selected from the group consisting of hydrogen, halogen, lower alky I, lower alkoxy, and lower perhaloalkyl;
G2 is -Y(CR3R+)PW(CR3R4),,, -;
W is O, or -NR6; p is 2; and
G3 is selected from the group consisting of optionally substituted aryl, optionally substituted heteroaryl, optionally substituted eycloalkyl, optionally substituted cyeloheteroalkyl, optionally substituted cycloalkenyl, and -N=C(R7R8).
In further embodiments, the compounds of the present invention wherein:
R3 and R4 are each hydrogen;
Figure imgf000006_0002
In yet further embodiments, the compounds of the present invention wherein:
A is optionally substituted phenyl;
R12 is hydrogen; and
R' and R2 are each independently selected from the group consisting of hydrogen, methyl, ethyl, and propyl;
In yet further embodiments, the compounds of the invention wherein W is -NR6.
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In yet further embodiments, the compounds of the invention wherein m is 1.
In yet further embodiments, the compounds of the invention wherein G3 is optionally substituted aryl.
In yet further embodiments, the compounds of the invention wherein said aryl is optionally substituted with one or more of the following: halogen, pcrhaloalkyl, and perhaloalkoxy.
In yet further embodiments, the compounds of the invention wherein said aryl is substituted with perhaloalkoxy.
In yet further embodiments, the compounds of the invention wherein said perhaloalkoxy is trifluoromethoxy.
In yet further embodiments, the compounds of the invention wherein said trifluoromethoxy substitutes said aryl in the para position.
In certain embodiments, the compounds of the invention wherein:
W is O; m is 0; and
Ci is optionally substituted aryl. "
In certain embodiments, the compounds of the invention wherein:
W is O; m is 0; and
G3 is optionally substituted heteroaryl.
In certain embodiments, the compounds of the invention wherein:
W is O; m is O; and
G1 Is-N=C(R7R8).
In further embodiments, the compounds of the invention wherein at least one R7 and Rs is optionally substituted aryl.
The yet further embodiments, the compounds of the invention wherein both R7 and R8 is optionally substituted aryl.
In preferred embodiments, the compounds of the present invention wherein:
A is optionally substituted phenyl;
R12 joins together with a carbon atom in G' to form a five to eight-membered carbocycle or heterocycle; and
R1 and R2 are each independently selected from the group consisting of hydrogen, methyl, ethyl, and propyl.
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Attorney Docket No. K0091-40 I-PC
In yet more preferred embodiments, the compounds of the present invention having a structural Formula (III) or (IV) as follows:
Figure imgf000008_0001
wherein X1 and X2 are each independently selected from the group consisting of hydrogen, halogen, hydroxy, optionally substituted lower alky I, optionally substituted cycloaikyl, optionally substituted heteroalkyl, optionally substituted cycloheteroalkyl, optionally substituted lower alkynyl, perhaloalky I, pcrhatoalkoxy, optionally substituted lower alkoxy, nitro, cyano, and NH2.
In yet more preferred embodiments, the compounds of the present invention wherein:
W is O; m is O;
X1 and X2 are each hydrogen; and
G3 is optionally substituted aryl.
In yet more preferred embodiments, the compounds of the present invention wherein:
W is O; m is O;
X i and X2 are each hydrogen; and
Q3 is optionally substituted heteroβryl.
In yet more preferred embodiments, the compounds of the present invention wherein:
W is O; m is O;
X i and X2 are each hydrogen; and
G3 Is -N=C(R7R8).
In yet more preferred embodiments, the compounds of the present invention wherein at least one of R7 and Ra is optionally substituted aryl.
In yet more preferred embodiments, the compounds of the present invention wherein both R7 and R8 are optionally substituted aryl.
In yet more preferred embodiments, the compounds of the present invention wherein:
W is N; m is 1 ;
Xi and Xi are each hydrogen;
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Attorney Docket No. K0091-401-PC
R3 and R* are hydrogen; and G3 is optionally substituted aryl.
!π certain embodiments, the compounds of the present invention having a structural Formula (V) as follows:
Figure imgf000009_0001
wherein X' and X2 ere each independently selected from the group consisting of hydrogen, halogen, hydroxy, optionally substituted lower alkyl, optionally substituted cyclonlkyl, optionally substituted heteroalkyl, optionally substituted cycioheteroalkyl, optionally substituted lower alkynyl, perhaloalkyl, perhafoalkoxy, optionally substituted lower alkoxy, nitro, cyano, and NJH-.
In yet further embodiments, the compounds of the present invention wherein:
W is O; m is O;
Xι andX2 areeach hydrogen; and
G3 is optionally substituted aryl.
In certain embodiments, the compounds of the present invention having a structural Formula (V]) as follows:
Figure imgf000009_0002
The present invention discloses that novel compounds disclosed herein can modulate at least one peroxisome proliferator-activated receptor (PPAR) function. Compounds described herein may be activating both PPAR-delta and PPAR-gamma or PPAR-alpha and PPAR-delta, or all three PPAR subtypes, or selectively activating predominantly PPAR-gamma, PPAR-alpha or PPAR-delta.
The present invention discloses a method of modulating at least one peroxisome proliferator- activated receptor (PPAR) function comprising the step of contacting the PPΛR with a compound of Formula I, as described herein. The change in cell phenotype, cell proliferation, activity of the PPAR, expression of the PPAR or binding of the PPAR with a natural binding partner may be monitored. Such methods may be modes of treatment of disease, biological assays, cellular assays, biochemical assays, or the like.
The present invention describes methods of treating a PPAR-mediated disease or metabolic disorder comprising identifying a patient having said disease, and administering a therapeutically effective
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Attorney Docket No. K0091-401-PC
amount of a compound of Formula 1, as described herein, to a patient. Thus, in certain embodiments, the disease to be treated by the methods of the present invention is selected from the group consisting of obesity, diabetes, hyperinsuliπemia, metabolic syndrome X, polycystic ovary syndrome, climacteric, disorders associated with oxidative stress, inflammatory response to tissue injury, pathogenesis of emphysema, ischemia-associated organ injury, doxorubicin-induced cardiac injury, drug-induced hepatotoxicity, atherosclerosis, mid hypertoxic lung injury. In another aspect, the present invention relates to a method of modulating at least one peroxisome proliferator-activated receptor (PPAR) function comprising the step of contacting the PPAR with a compound of Formula I, as described herein. The change in cell phenotype, cell proliferation, activity of the PPAR, or binding of the PPAR with a natural binding partner may be monitored. Such methods may be modes of treatment of disease, biological assays, cellular assays, biochemical assays, or the like. In certain embodiments, the PPAR may be selected from the group consisting of PPARα, PPARS, and PPARγ. In preferred embodiments, the PPAR is PPARS.
The invention also discloses the use of a PPAR-delta modulator compound according to the invention for the manufacture of a medicament for raising HDL, lowering LDLc, shifting LDL particle size from small dense to normal LDL, or inhibiting cholesterol absorption.
The invention discloses methods of treatment of a PPAR-delta mediated disease or condition comprising administering a therapeutically effective amount of a compound according the present invention or a pharmaceutically acceptable salt, ester, amide, or prodrug thereof. In certain embodiments, the present invention discloses: methods for treating Type 2 diabetes, decreasing insulin resistance or lowering blood pressure in a subject; methods for treating atherosclerotic diseases including vascular disease, coronary heart disease, cerebrovascular disease and peripheral vessel disease in a subject; methods for treating cancers including colon, skin, and lung cancers in a subject; and methods for treating inflammatory diseases, including rheumatoid arthritis, asthma, osteoarthritis and autoimmune disease in a subject, ail comprising the administration of a therapeutic amount of a PPAR-delta modulator compound according to the present invention.
The invention further discloses compounds of the invention or pharmaceutical compositions thereof for use in the manufacture of a medicament for the prevention or treatment of a disease or condition ameliorated by the modulation of a PPAR-delta. Certain embodiments of the invention include the use of a PPAR-delta modulator compound having structural formula (I) for the manufacture of a medicament for the treatment of: Type 2 diabetes, or for decreasing insulin resistance or lowering blood pressure; atherosclerotic diseases including vascular disease, coronary heart disease, cerebrovascular disease and peripheral vessel disease; cancers including colon, skin, and lung cancers; and inflammatory diseases, including rheumatoid arthritis, asthma, osteoarthritis and autoimmune disease, in a patient in need thereof.
Another aspect of the invention are compounds of the invention or pharmaceutical compositions thereof for use in the treatment of disease or condition ameliorated by the modulation of a PPAR-delta wherein said PPAR-delta mediated disease or condition is dyslipidemia, metabolic
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syndrome X, heart failure, hypercholesteremia, cardiovascular disease, type I] diabetes rnellitus, type I diabetes, insulin resistance hyperlipidemia, obesity, anorexia bulimia, inflammation and anorexia nervosa.
Another aspect of the invention are compounds, pharmaceutically acceptable prodrugs, pharmaceutically active metabolites, or pharmaceutically acceptable salts thereof and having an ECJO value less than 5μM as measured by a functional cell assay.
Another aspect of the invention are methods of modulating a peroxisome proliferator- acti vated receptor (PPAR) function comprising contacting said PPAR with a compound of the present invention and monitoring a change in cell phenotype, cell proliferation, activity of said PPAR, or binding of said PPAR with a natural binding partner.
Another aspect of the invention are method of modulating a peroxisome proliferator- activated receptor (PPAR) wherein the PPAR is selected from the group consisting of PPAR-alpha, PPAR-delta, and PPAR-gamma.
Another aspect of the invention are methods of treating a disease comprising identifying a patient in need thereof, and administering a therapeutically effective amount of a compound of (he present invention to said patient wherein said disease is selected from the group consisting of obesity, diabetes, hyperinsulinemia, metabolic syndrome X, polycystic ovary syndrome, climacteric, disorders associated with oxidative stress, inflammatory response to tissue injury, pathogenesis of emphysema, ischemia-associated organ injury, doxorubicin-induced cardiac injury, drug-induced hepatotoxicity, atherosclerosis, and hypertonic lung injury.
Another aspect of the invention are compounds which modulates a peroxisome proliferator- acti vated receptor (PPAR) function, preferably wherein said PPAR is selected from the group consisting of PPARα, PPARδ, and PPARy.
Another aspect of the invention are compounds or composition for use in the treatment of a disease or condition ameliorated by the modulation of a PPAR such as PPARα, PPARδ, and PPARy, wherein the disease or condition is dyslipidemia, metabolic syndrome X, heart failure, hypercholesteremia, cardiovascular disease, type Il diabetes mellitus, type I diabetes, insulin resistance hyperlipidemia, obesity, anorexia bulimia, inflammation and anorexia nervosa.
Another aspect of the invention are compounds or compositions according for use in the manufacture of a medicament for the prevention or treatment of disease or condition ameliorated by the modulation of a PPAR such as PPARα, PPARδ, and PPARy.
As used in the present specification the following terms have the meanings indicated:
The term "acyl," as used herein, alone or in combination, refers to a carbonyl attached to an alkenyl, alkyl, aryl, cycloalkyl, heteroβryl, heterocycle, or any other moiety were the atom attached to the carbonyl is carbon. An "acetyl" group refers to a -C(O)CH.-) group. An "alkylcarbonyl" or "alkanoyl" group refers to an olkyl group attached to the parent molecular moiety through a carbonyl group. Examples
10
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of such groups include methylcarbonyt and βthylcarbonyl. Examples of acyl groups include formyl, alkanoyl and aroyl.
The term "alkenyl," as used herein, alone or in combination, refers to a straight-chain or branched- chain hydrocarbon radical having one or more double bonds and containing from 2 to 20, preferably 2 to 6, carbon atoms. Alkenylene refers to a carbon-carbon double bond system attached at two or more positions such as ethenylene [(-CH=CfcL-),(-C::C-)]. Examples of suitable alkenyl radicals include ethenyl, propeπyl, 2-methylpropenyl, 1 ,4-butadienyl and the like.
The term "alkoxy," as used herein, alone or in combination, refers to an alkyl ether radical, wherein the term alkyl is as defined below. Examples of suitable alkyl ether radicals include methoxy, ethoxy, n-propoxy, isopnopoxy, n-butoxy, iso-buioxy, sec-butoxy, tert-butoxy, and the like.
The term "alkyl," as used herein, alone or in combination, refers to a straight-chain or branched- chain alkyl radical containing from I to and including 20, preferably I to 10, and more preferably 1 to 6, carbon atoms. Alkyl groups may be optionally substituted as defined herein. Examples of alkyl radicals include methyl, ethyl, n-propyl, isopropyl, n-butyl, isobutyl, sec-butyl, tert-butyl, pentyl, iso-amyl, hexyl, octyl, noyl end the like. The term "alkylene," as used herein, alone or in combination, refers to a saturated aliphatic group derived from a straight or branched chain saturated hydrocarbon attached at two or more positions, such as methylene (-CH2-).
The term "alkylamino," as used herein, alone or in combination, refers to an alkyl group attached to the parent molecular moiety through an amino group. Suitable alkylamino groups may he mono- or dialkylated, forming groups such as, for example, N-methylamino, N-ethylamino, N,N-dimeihylamino, N.N-ethylmethylamino and the like.
The term "alkylidene," as used herein, alone or in combination, refers to an alkenyl group in which one carbon atom of the carbon-carbon double bond belongs to the moiety to which the alkenyl group is attached.
The term "alkytthio," as u3ed herein, alone or in combination, refers to an alkyl thioether (K-S-) radical wherein the term alkyl is as defined above and wherein the sulfur may be singly or doubly oxidized. Examples of suitable alkyl thioether radicals include methylthio, ethylthio, n-propylthio, isopropylthid, n-butylthio, iso-butylthio, sec-butylthio, tert-butylthio, methanesulfonyl, ethanesulfinyl, and the like.
The term "alkynyl," as used herein, alone or in combination, refers to a straight-chain or branched chain hydrocarbon radical having one or more triple bonds and containing from 2 to 20, preferably from 2 to 6, more preferably from 2 to 4, carbon atoms. "Alkynylenβ" refers to a carbon-carbon triple bond attached at two positions such as ethynylene (-C:::C-, -C≡C-). Examples of alkynyl radicals include ethynyl, propynyl, hydroxypropynyl, butyπ-l-yl, butyn-2-yl, pentyπ-l-yl, 3-methylbutyn-J-yl, hexyn-2-yl, and the like.
The terms "amido" and "carbamoyl,"as used herein, alone or in combination, refer to an amino group as described below attached to the parent molecular moiety through a carboπyl group, or vice versa.
11
PACE 14/55 • RCVO AT 1/12/20077:21:37 PM [Eastern Standard Time] * SVR:USPTO-eFXRF-1/15 • DNI8:2733201 * C6ID: " DURATION (mm-ss):31-50 .
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Attorney Docket No. K.0091-40I-PC
The term "C-amido" as used herein, alone or in combination, refers to a -C(=O)-NR2 group with R as defined herein. The term "N-amido" as used herein, alone or in combination, refers to a RC(=0)NH- group, with R as defined herein. The term "acylamino" as used herein, alone or in combination, embraces an acyl group attached to the parent moiety through an amino group. Λn example of an "acylamino" group is βcetylamino (CH3C(O)NH-).
The term "amino," as used herein, alone or in combination, refers to — NRR', wherein R and R" are independently selected from the group consisting of hydrogen, alkyl, acyl, heteroalkyl, aryl, cyoloalkyl, heteroaryl, and heterocycloalkyl, any of which may themselves be optionally substituted.
The term "aryl," as used herein, alone or in combination, means a cαrbocyclic aromatic system containing one, two or three rings wherein such rings may be attached together in a pendent manner or may be fused. The term "aryl" embraces aromatic radicals such as benzyl, phenyl, naphthyl, anthracenyl, phenanthryl, indanyl, indenyl, annulenyl, αzutenyl, tetrahydrotiaphtbyl, and biphenyl.
The term "arylalkenyl™ or "aralkenyl," as used herein, alone or in combination, refers to an aryl group attached to the parent molecular moiety through an alkeπyl group.
The term "arylalkoxy" or "aralkoxy," as used herein, aJone or in combination, refers to an aryj group attached to the parent molecular moiety through an alkoxy group.
The term "arylalkyl" or "aralkyl," as used herein, alone or in combination, refers to an aryl group attached to the parent molecular moiety through an alkyl group.
The term "arylalkynyl" or "aralkynyl," as used herein, alone or in combination, refers to an aryl group attached to the parent molecular moiety through an alkynyl group.
The term "arylalkaπoyl" or "aralkanoyl" or "aroyl,"as used herein, alone or in combination, refers to an acyl radical derived from an aryl-substituted alkanecarboxylic acid such as benzoyl, πapthoyl, phenylacetyl, 3-phenylpropionyl (hydrocirmamoyl), 4-phenyIbutyryl, (2-naphthyl)acetyl, 4- chlorøhydrocinnamoyl, and the like.
The term aryloxy as used herein, alone or in combination, refers to an aryl group attached to the parent molecular moiety through an oxy.
The terms "benzo" and "benz," as used herein, alone or in combination, refer to the divalent radical
Figure imgf000013_0001
derived from benzene. Examples include benzothiophene and benzimidazole.
The term "carbamate," as used herein, alone or in combination, refers to an ester of carbnmic acid (-NHCOO-) which may be attached to the parent molecular moiety from either the nitrogen or acid end, and which may be optionally substituted as defined herein.
The term "O-carbamyl" as used herein, alone or in combination, refers to a -OC(O)NRR', group-with R and R' as defined herein.
The term "N-carbamyl" as used herein, alone or in combination, refers to a ROC(O)NR'- group, with R and R' as defined herein.
The term "carbonyl," as used herein, when alone includes fortnyl [-C(O)H] and in combination is a -C(O)- group.
12
PΛCC 15/55 • RCVD AT 1/12/20077:21:37 PM [Eastern Standard Time] * 8VR:USPTO-BFXRF.1/15 • DNIS:2733201 • C8ID: ' DURATION (mm-ss):31-50 o' Thβodosia Slmpkins Page 16 of 55 2007-01-1300:21:39 (GMT) From: LaVem Hall
Attorney Docket No, K0091-401 -PC
The term "carboxy." as used herein, refers to -C(O)OH or the corresponding "carboxylate" anion, such as is in a carboxylic acid salt. An "O-carboxy" group refers to β RC(O)O- group, where R is as defined herein. A "C-carboxy" group refers to a— C(O)OR groups where R is as defined herein.
The term "cyano," as used herein, alone or in combination, refers to -CN.
The term "oyoloalkyl," as used herein, alone or in combination, refers to a saturated or partially saturated monocyclic, bicyclic or tricyclic alkyl radical wherein each cyclic moiety contains from 3 to 12, preferably five to seven, carbon atom ring members and which may optionally be a benzo fused ring system which is optionally substituted as defined herein. Examples of such cycloalkyl radicals include cyclopropyl, cyclobutyl, cyclopeπtyl, cyclohexyl, cycioheptyl, octahydronaphthyl, 2,3-dihydro-I H-indenyl, adamantyl and the like. "Bicyclic" and "tricyclic" as used herein are intended to include both fused ring systems, such as decahydonapthalene, octahydronaptbalene as well as the multicyclic (mu)ticentered) saturated or partially unsaturated type. The latter type of isomer is exemplified in general by, bicyclo[1,t ,l]ρentane, camphor, adβmantane, and bicyclof3.2,l]octαne.
The term "ester," as used herein, alone or in combination, refers to a carboxy group bridging two moieties linked at carbon atoms.
The term "ether," as used herein, alone or in combination, refers to an oxy group bridging two moieties linked at carbon atoms.
The term "halo," or "halogen," as used herein, alone or in combination, refers to fluorine, chlorine, bromine, or iodine.
The term "haloalkoxy," as used herein, alone or in combination, refers to a haloalkyl group attached to the parent molecular moiety through an oxygen atom.
The term "haloalkyl," as used herein, alone or in combination, refers to an alkyl radical having the meaning as defined above wherein one or more hydrogens are replaced with a halogen. Specifically embraced are monohaloalkyl, dihaloaJkyl and polyhaloalkyl radicals. A monohaloalkyl radical, for one example, may have an iodo, bromo, chJoro or fluoro atom within the radical. Dihnlo and poly haloalkyl radicals may have two or more of the same halo atoms or a combination of different halo radicals. Examples of hβloalkyl radicals include fluoromethyl, difluoromethyl, trifluoromethy), chloromethy), dichloromethyl, trichloromethyl, pentafluoroethyl, heptafluoropropyl, difluorochloromethyl, dichlorofluoromelhyl, difluoroethyl, difluoropropyl, dichloroethyl and dichloropropyl. "Haloalkylene" refers to a haloalkyl group attached at two or more positions. Examples include fluoromethylene (-CFH-), difluoromethylene (-CF2 -), chloromethyiene (-CHC1-) and the like.
The term "heteroalkyl," as used herein, alone or in combination, refers to a stable straight or branched chain, or cyclic hydrocarbon radical, or combinations thereof, fully saturated or containing from 1 to 3 degrees of unsaturation, consisting of the stated number of carbon atoms and from one to three heteroatorπs selected from the group consisting of O, N, and S, and wherein the nitrogen and sulfur atoms may optionally be oxidized and the nitrogen heteroatom may optionally be quatemizetJ. The heteroatom(s)
13
PACE 1S/5S • RCVD AT 1/12/20077:21 :37 PM [Eastern Standard Time]* 8VRIUSPTO-B=XRP-IfIS DNIS:2733201 • CSID: * DURATION (mm-*s):31-50 o: Thβαdosia SimpWns Page 17 of 55 2007-01-1300:21:39 (GMT) From: LaVβrn Hall
Attorney Docket No. K0091-40I-PC
O, N and S may be placed at βπy interior position of the heteroalkyl group. Up to two heteroatoms may be consecutive, such as, for example, -CH2-NH-OCH3.
The term "heteroaryl," as used herein, alone or in combination, refers to 3 to 7 membered, preferably 5 to 7 membered, unsaturated heteromonocyclic rings, or fused polycyclic rings in which at least one of the fused rings is unsaturated, wherein at least one atom is selected from the group consisting of O, S, and N. The term also embraces fused polycyclic groups wherein heterocyclic radicals are fused with aryl radicals, wherein heteroaryl radicals are fused with other heteroaryl radicals, or wherein heteroaryl radicals are fused with cycloajkyl radicals. Examples of heteroaryl groups include pyrrolyl, pyrroiinyl, imidazolyl, pyrazolyl, pyridyl, pyrimidinyl, pyrazinyl, pyridazinyl, triazolyl, pyronyl, furyl, thienyl, oxazolyl, isoxazolyl, oxadiazolyl, thiazolyl, thiadiazolyl. isothiazolyl, indolyl, isoindolyl, indolizinyl, benzimidazoJyl, quinolyl, isoquinolyl, indazolyl, benzotriazolyl, benzoxazolyl, benzoxadiasolyl, benzothiazolyl, benzothiαdiazolyl, benzoniryl, benzothienyl, tetrazotopyridazinyl, thienopyridine, furopyridine, pyrrolopyridine end the like.
The terms "heterocycloalkyl" and, interchangeably, "heterocycle," as used herein, alone or in combination, each refer to a saturated, partially unsaturated, or fully unsaturated monocyclic, bicyclic, or tricyclic heterocyclic radical containing at least one, preferably I to 4, and more preferably I to 2 heteroatoms as ring members, wherein each said heteroatom may be independently selected from the group consisting of nitrogen, oxygen, and sulfur, and wherein there are preferably 3 to S ring members in each ring, more preferably 3 to 7 ring members in each ring, and most preferably S to 6 ring members in each ring. "Heterocycloalkyl" and "heterooycle" are intended to include sulfones, sulfoxides, N-oχides of tertiary nitrogen ring members, and cαrbocyclic fused and benzo fused ring systems; additionally, both terms also include systems where a heterocycle ring is fused to an aryl group, as defined herein, or an additional heterocycle group. Heterocycle groups of the invention are exemplified by aziridinyl, azetidinyl, 1,3-benzodioxoJyl, dihydroisoindolyl, dihydroisσquinolinyl, dihydrocinnoHny), dihydrobenzodioxinyl, dihydro[I,3]oxazolor4,5-b]pyridinyl, benzothiazolyj, dihydroindolyl, dihy-dropyridinyl, 1 ,3-dioxβny], 1,4- dioxanyl, 1 ,3-dioxolany I, isoiπdofiπyl, morpholiπyl, piperazinyl, pyrrolidinyl, tetrahydropyridinyl, piperidinyl, thiomorpholinyl, and the like. The heterocycle groups may be optionally substituted unless specifically prohibited.
The term "hydraziπyl" as used herein, alone or in combination, refers to two amino groups joined by a single bond, i.e., -N-N-.
The term "hydroxy," as used herein, alone or in combination, refers to -OH.
The term "hydroxyalkyl," as used herein, alone or in combination, refers to a hydroxy group attached to the parent molecular moiety through an alkyl group.
The term "imino," as used herein, alone or in combination, refers to =N-.
The term "iminohydroxy," as used herein, alone or in combination, refers to =N(OH) and =N-O-.
14
PACE 17/55 RCVD AT 1/12/2007 7:21:37 PM pastern standard Time] • BVR:USPTO-EFXRF-1/15 • DNJB:27332.1 • CSlD: • DURATION (mm-ss):3i-50 W
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Attorney Docket No. K.009I-401-PC
The phrase "m the man chain" refers to the longest contiguous or adjacent chain of carbon atoms starting at the point of attachment of a group to the compounds of this invention.
The term "isocyanato" refers to a -NCO group
The term "isothiocyanato" refers to a -NCS group
The phrase "linear chain of atoms" refers to the longest straight chain of atoms independently selected from carbon, nitrogen, oxygen and sulfur.
The term "lower," as used herein, alone or in combination, means containing from 1 to and including 6 carbon atoms.
The term "mercβptyl" as used herein, alone or m combination, refers to an RS- group, where R is as defined herein.
The term "nitro," as used herein, alone or in combination, refers to -NO2.
The terms "oxy" or "oxa," as used herein, alone or in combination, refer to -O-
The term "oxo," as used herein, alone or in combination, refers to =0.
The term "perhaloalkoxy" refers to an alkoxy group where all of the hydrogen atoms are replaced by halogen atoms
The term "pβrhaloslkyl" as used herein, alone or in combination, refers to an alkyl group where all of the hydrogen atoms are replaced by halogen atoms.
The terms "sulfonate," "sulfonic acid," and "sulfonic," as used herein, alone or in combination, refer the -SO3H group and its anion as the sulfonic acid is used in salt formation.
The term "sulfanyl," as used herein, alone or in combination, refers to -S-
The term "sulfinyl," as used herein, alone or in combination, refers to -S(O)-
The term "sutfbnyl," as used herein, alone or in combination, refers to — SOr-
Thβ term "N-sulfonamιdo" refers to a RSC=O)2NB.'- group with R and R' as defined herein
The term "S-sulfonamido" refers to a -S(=O)2NRR', group, with R and R' as defined herein
The terms "thia" and "thio," as used herein, alone or in combination, refer to a — S- group or an ether wherein the oxygen is replaced with sulfur. The oxidized derivatives of the thio group, namely sulfinyl and sulfoπyl, are included in the definition of thia and thio.
The term "thiol," as used herein, alone or in combination, refers to an -SH group.
The term "thiocarbonyl," as used herein, when alone includes thioformyl -C(S)H and in combination is a -C(S)- group
The term "N-thiocarbamyl" refers to an ROC(S)NR'- group, with R and R' as defined herein
The term "O-thiocarbamyl" refers to a -OC(S)NRR', group with R and R'as defined herein
The term "thiocyanato" refers to a -CNS group
The term "tπhalomethanesulfonamido" refers to a XjCS(O)SNR- group with X is a halogen and R as defined herein.
The term "trihalomethanesulfonyl" refers to a X3CS(O)r- group where X is a halogen
The term "tnhalomethoxy" refers to a X3CO- group where X is a halogen
15
PAGE 18/55 ' RCVD AT 1/12/20077:21:37 PM [Eastern Standard Time] * 8VR:U8PTO-€FXRF-1J15 " DNIB:27332D1 ' CSID: • DURATION <mm-ss):31-50 o Thβodosia Simpkms Page 19 of 55 2007-01-1300'21:39 (GMT) From LaVβm Hall
Attorney Docket No. K009I-401-PC
The term "tπ substituted silyl," as used herein, alone or in combination, refers to a silicone group substituted at its three free valences with groups as listed herein under the definition of substituted amino. Examples include tπmethysilyl, tert-butyldimethylsilyl, lriphenylsilyi and the like.
Any definition herein may be used in combination with any other definition to describe a composite structural group. By convention, the trailing element of any such definition is that which attaches to the parent moiety. For example, the composite group alkylamido would represent an alkyl group attached to the parent molecule through an amido group, and the term alkoxyalkyt would represent an alkoxy group attached to the parent molecule through an alkyi group,
When a group is defined to be "null/' what is meant is that said group is absent
The term "optionally substituted" means the anteceding group may be substituted or unsυbstituted. When substituted, the substituenls of an "optionally substituted" group may include, without limitation, one or more substiruents independently selected from the following groups or a particular designated set of groups, alone or in combination: lower alkyl, lower alkenyl, loweralkynyl, lower alkanoyl, lower heteroalkyl, lower heterocycloalkyl, lower hftloalkyl, lower haloalkenyl, lower haloalkynyl, lower perhaloalkyl, lower perhaloalkoxy, lower cycloalkyl, phenyl, aryl, aryloxy, lower alkoxy, lower haloalkoxy, oxo, lower acyloxy, carbonyl, carboxyl, lower alkylcarbonyl, lower carboxyester, lower carboxamido, cyano, hydrogen, halogen, hydroxy, amino, lower alkylamino, arylamino, amido, nitro, thiol, lower alkylthio, arylthio, lower alkylsulfinyl, lower alkylsulfonyl, arylsuJfϊnyl, arylsulfonyl, arylthio, sulfonate, sulfonic acid, trisubstituted silyl, N3, SH, SCH3, C(O)CHi, CO3CH3, CO2H, pyridinyl, thiophene. fiiranyl, lower carbamate, and lower urea. Two substituents may be joined together to form a fused five-, six-, or seven-menbered carbocyclic or heterocyclic ring consisting of zero to three heteroatoms, for example forming methylenedioxy or cthylenedioxy. An optionally substituted group may be unsubstituted (e.g., -CH2CH3), fully substituted (e.g., -CF3CF3), monosubstituted (e.g., -CH2CH2F) or substituted at a level anywhere in-between fully substituted and monosubstituted (e.g., -CH2CF3). Where substituents are recited without qualification as to substitution, both substituted and unsubstituted forms are encompassed, Where a substituent is qualified as "substituted," the substituted form is specifically intended Additionally, different sets of optional substituents to a particuar moiety may be defined as needed; in these cases, the optional substitution will be as defined, often immediately following the phrase, "optionally substituted with "
The term R ox the term R.', appearing by itself and without a number designation, unless otherwise defined, refers to a moiety selected from the group consisting of hydrogen, alkyl, cycloalkyl, heteroalkyl, aryl, heteroaryl and heterocycloalkyl, any of which may be optionally substituted. Such R. and R' groups should be understood to be optionally substituted as defined herein. Whether an R group has a number designation or not, every R group, including R, R* and R" where n=(l, 2, 3, .. n), every substituent, and every term should be understood to be independent of every other in terms of selection from a group. Should any variable, substituent, or term (e.g. aryl, heterocycle, R, etc.) occur more than one time in a formula or generic structure, its definition at each occurrence is independent of the definition at every other
16
PACE 19/55 • RCVDAT 1/1M0077:21:37 PM [Eastern Standard Time] * SVH:USPTO^FXRF.1/15 • DNIB:2733201 • CGID: • DURATION <mm-ss):31-50 o: Theodαsia Simpkins Page 20 of 55 2007-01-1300:21:39 (GMT) From: LaVβrn Hall
Attorney Docket No. K0091-40I-PC
occurrence. Those of skill in the art will further recognize that certain groups may be attached to a parent molecule or may occupy a position in a chain of elements from either end as written. Thus, by way of example only, an unsymmetrical group such as -C(O)N(R)- may be attached to the parent moiety at either the carbon or the nitrogen.
Asymmetric centers exist in the compounds of the present invention. These centers are designated by the symbols "R" or "S," depending on the configuration of substituents around the chiral carbon atom. It should be understood that the invention encompasses all stereochemical isomeric forms, including diastereomeric, enantiomeric, and epimeric fomis.as well as d-isomcrs and I -isomers, and mixtures thereof Individual stereoisomers of compounds can be prepared synthetically from commercially available starting materials which contain chiral centers or by preparation of mixtures of enantiomeric products followed by separation such as conversion to a mixture of diastereomers followed by separation or recrystallization, chromatographic techniques, direct separation of enantiomers on chiral chromatographic columns, or any other appropriate method known in the art. Starting compounds of particular stereochemistry are either commercially available or can be made and resolved by techniques known in the art. Additionally, the compounds of the present invention may exist as geometric isomers. The present invention includes all cis, trans, syn, anti, entgegen (E), and zusammen (Z) isomers as well as the appropriate mixtures thereof. Additionally, compounds may exist as tautomcrs; all tautomeric isomers are provided by this invention. Additionally, the compounds of the present invention can exist in unsolvated as well as solvated forms with pharmaceutically acceptable solvents such as water, ethanol, and the like. In general, the solvated forms are considered equivalent to the unsolvated forms for the purposes of the present invention.
The term "bond" refers to a covalent linkage between two atoms, or two moieties when lhe atoms joined by the bond are considered to be part of larger substructure. A bond may be single, double, or triple unless otherwise specified.
The term "combination therapy" means the administration of two or more therapeutic agents to treat a therapeutic condition or disorder described in the present disclosure. Such administration encompasses co-administration of these therapeutic agents in a substantially simultaneous manner, such as in a single capsule having a fixed ratio of active ingredients or in multiple, separate capsules for each active ingredient. In addition, such administration also encompasses use of each type of therapeutic agent in a sequential manner. In either case, the treatment regimen will provide beneficial effects of the drug combination in treating the conditions or disorders described herein.
"PPAR modulator" is used herein to refer Io a compound that exhibits an IC50 with respect to PPAR activity of no more than about 100 μM and more typically not more than about 50 .mu.M, as measured in the PPAR assay described generally hereinbelow. " ICs0" is that concentration of inhibitor which reduces the activity of an enzyme (e.g., PPAR) to half-maximal level, Representative compounds of the present invention have been discovered to exhibit inhibitory activity against PPAR. Compounds of the present invention preferably exhibit an ICJ0 with respect to PPAR of no more than about 10 μM, more
17
PACE 2W5S • RCVD AT 1/12/20D77:21:3f PM [Eastern Standard Time) • 8VR:USPTO-EFXRF-1/15 • DM8:2733201 * C8ID: • DURATION (mm-ss):31.50 _
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Attorney Docket No. K0091-40I-PC
preferably, no more than about 5 μM, even more preferably not more than about 1 μM, and most preferably, not more than about 200 nM, as measured in the PPAR assays described herein.
As used herein, reference to "treatment" of a patient is intended to include prophylaxis. The term "patient" means all mammals including humans. Examples of patients include humans, cows, dogs, cats, goats, sheep, pigs, and rabbits.
The term "therapeutically effective amount" as used herein refers to that amount of the compound being administered which will relieve to some extent one or more of the symptoms of the disease, condition or disorder being treated. In reference to the treatment of diabetes or dysJipidemia a therapeutically effective amount refers to that amount which has the effect of (I) reducing the blood glucose levels; (2) normalizing lipids, e.g. triglycerides, low-density lipoprotein; (3) relieving to some extent (or, preferably, eliminating) one or more symptoms associated with the disease, condition or disorder to be treated; and/or (4) raising HDL.
The terms "enhance" or "enhancing" means to increase or prolong either in potency or duration a desired effect. Thus, in regard to enhancing the effect of therapeutic agents, the term "enhancing" refers to the ability to increase or prolong, either in potency or duration, the effect of other therapeutic agents on a system. An "enhancing-effective amount," as used herein, refers to an amount adequate to enhance the effect of another therapeutic agent in a desired system. When used in a. patient, amounts effective for this use will depend on the severity and course of the disease, disorder or condition (including, but not limited to, metabolic disorders), previous therapy, the patient's health status and response to the drugs, and the judgment of the treating physician. It is considered well within the skill of the art for one to determine such enfiancing-efFective amounts by routine experimentation.
Unless otherwise indicated, when a substituent is deemed to be "optionally substituted," it ia meant that the substituent is a group that may be substituted with one or more grouρ(s) individually and independently selected from alkyl, cycloalkyl, aryl, heteroaryl, heleroalicyclic, hydroxy, alkoxy, perhaloalkoxy,(ρreferobly perfluoroalkyloxy), mono or dihaloalkoxy, aryloxy, mercapto, αikylthio, arylthio, cyano, halo, carbonyl, thiocarbonyl, O-cαrbamyl, N-carbarπyl, O-thiocarbamyl, N-thiocarbamyl, C-αmido, N- ami do, S-sulfonamido, N-sulfonamido, C-carboxy, O-carboxy, isocyaπato, thiocyanato, isothiocyaπato, πitro, perhaloalkyl, perfluoroalkyl, silyl, trihαlomethanesulfόnyl, and amino, including mono- and di-substituted amino groups, and the protected derivatives thereof. The protecting groups that may form the protective derivatives of the above substitueπts are known to those of skill in the art and may be found in references such as Greene and Wuts, above.
Molecular embodiments of the present invention may possess one or more chirαl centers and each center may exist in the R or S configuration. The present invention includes all diastcreomeric, enantiomeric, and epimeric forms as well as the appropriate mixtures thereof. Stereoisomers may be obtained, if desired, by methods known in the art as, for example, the separation of stereoisomers by chiral chromatographic columns. Additionally, the compounds of the present invention may exist as geometric
18
PACE 21/55 ' RCVD AT 1/12/200? 7:21:37 PM [Eastern Standard Time] * BVH:USt>TO-EFXRF-1/15 DNIS:2733201 * CSID: • DURATION (mm-ss):31-50 Ta: Theodasta Simpkjπs Page 22 of 55 2007-01-1300:21:39 (GMT) From: LaVerπ Hall
Attorney Docket No. K0091 -401-PC
isomers. The present invention includes all cis, trans, syn, anti, entgegen (E), and zusammen (Z) isomers as well as the appropriate mixtures thereof.
In some situations, compounds may exist as tautomers. All tautomersare included within Formula I and are provided by this invention.
In addition, the compounds of the present invention can exist in unsolvnted as well as solvated forms with pharmaceutically acceptable solvents such as water, ethanol, and the like. In general, the solvated forms are considered equivalent to the unsolvαted forms for the purposes of the present invention.
In another aspect, the present invention relates to a method of treating a disease comprising identifying a patient in need thereof, and administering a therapeutically effective amount of a compound of Formula I, as described herein, to the patient.
The third subtype of PPARs, PPARδ (PPΛRδ, NUCl), is broadly expressed in the body and has been shown to be a valuable molecular target for treatment of dyslipidemia and other diseases. For example, in a recent study in insulin-resistant obese rhesus monkeys, a potent and selective PPARδ compound was shown to decrease VLOL and increase HDL in a dose response manner (Oliver el al,, Proc, Natl. Acad. Sci. U. S. Λ.98: 5305, 200I). Also, in a recent study in wild-type end HDL-lacking, ABCAl"'" mice, a different potent and selective PPARS compound was shown to reduce fractional cholesterol absorption in the intestine, and coincidently reduce expression of the cholesterol-absorption protein NPCI Ll (van der Veen et al., i. Lipid Res. 2005 46: 526-534).
The compounds of the invention are useful in the treatment of a disease or condition ameliorated by the modulation of an PPAR-delta. Specific diseases and conditions modulated by PPAR-delta and for which the compounds and compositions are useful include but arc not limited to dyslipidemia, syndrome X, heart failure, hypercholesteremia, cardiovascular disease, type II diabetes mellitus, type I diabetes, insulin resistance hyperlipidemia, obesity, anorexia bulimia, inflammation and anorexia nervosa. Other indications include reduction of scarring and wound healing.
The compounds of the invention may also be used (a) for raising H0L in a subject; (b) for treating Type 2 diabetes, decreasing insulin resistance or lowering blood pressure in a subject; (c) for decreasing LDLc in a subject; (d) for shifting LDL particle size from small dense to normal dense LDL in a subject; (e) for reducing cholesterol absorption or increasing cholesterol excretion in a subject; (f) for reducing the expression of NPCl L I in a subject; (g) for treating atherosclerotic diseases including vascular disease, coronary heart disease, cerebrovascular disease and peripheral vessel disease in a subject; and (h) for treating inflammatory diseases, including rheumatoid arthritis, asthma, osteoarthritis and autoimmune disease in a subject.
The compounds of the invention may also be used for treating, ameliorating, or preventing a disease or condition selected from the group consisting of obesity, diabetes, hyperinsulinemia, metabolic syndrome X, polycystic ovary syndrome, climacteric, disorders associated with oxidative stress, inflammatory response to tissue injury, pathogenesis of emphysema, ischemia-associated organ injury.
19
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Attorney Docket No. K009I-401-PC
doxorubicin-induced cardiac injury, drug-induced hepatotoxicity, atherosclerosis, and hypβrtoxic lung injury.
The compositions containing the compound(s) described herein can be administered for prophylactic and/or therapeutic treatments. In therapeutic applications, the compositions are administered to a patient already suffering from a disease, condition or disorder mediated, modulated or involving the PPARs, including but not limited to metabolic diseases, conditions, or disorders, as described above, in an amount sufficient to cure or at least partially arrest the symptoms of the disease, disorder or condition. Amounts effective for this use will depend on the severity and course of the disease, disorder or condition, previous therapy, the patient's health status and response to the drugs, and the judgment of the treating physician. It is considered well within the skill of the art for one to determine such therapeutically effective amounts by routine experimentation (e.g., a dose escalation clinical trial).
In prophylactic applications, compositions containing the compounds described herein are administered to a patient susceptible to or otherwise at risk of a particular disease, disorder or condition mediated, modulated or involving the PPARs, including but not limited to metabolic diseases, conditions, or disorders, as described above. Such an amount is defined to be a "prophylactically effective amount or dose." In this use, the precise amounts also depend on the patient's state of health, weight, and the like. It is considered well within the skill of the art for one to determine such prophylactically effective amounts by routine experimentation (e.g., a dose escalation clinical trial).
Once improvement of the patient's conditions has occurred, a maintenance dose is administered if necessary. Subsequently, the dosage or the frequency of administration, or both, can be reduced, as a function of the symptoms, to a level at which the improved disease, disorder or condition is retained. When the symptoms have been alleviated to the desired level, treatment can cease. Patients can, however, require intermittent treatment on a long-term basis upon any recurrence of symptoms.
The amount of a given agent that will correspond to such an amount will vary depending upon factors such as the particular compound, disease condition and its severity, the identity (e.g., weight) of the subject or host in need of treatment, but can nevertheless be routinely determined in a manner known in the art according to the particular circumstances surrounding the case, including, e.g., the specific agent being administered, the route of administration, the condition being treated, and the subject or host being treated. In general, however, doses employed for adult human treatment will typically be in the range of 0.02-5000 mg per day, preferably 1-1500 mg per day. The desired dose may conveniently be presented in a single dose or as divided doses administered at appropriate intervals, for example as two, three, four or more sub- doses per day.
In certain instances, it may be appropriate to administer at least one of the compounds described herein (or a pharmaceutically acceptable salt, ester, amide, prodrug, or solvate) in combination with another therapeutic agent. By way of example only, if one of the side effects experienced by a patient upon receiving one of the compounds herein is hypertension, then it may be appropriate to administer an antihypertensive agent in combination with the initial therapeutic agent. Or, by way of example only, the
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Attorney Docket No. K009I-401-PC
therapeutic effectiveness of one of the compounds described herein may be enhanced by administration of an adjuvant (i.e., by itself the adjuvant may only have minimal therapeutic benefit, but in combination with another therapeutic agent, the overall therapeutic benefit to the patient is enhanced). Or, by way of example only, the benefit of experienced by a patient may be increased by administering one of the compounds described herein with another therapeutic agent (which also includes a therapeutic regimen) that also has therapeutic benefit. By way of example only, in a treatment for diabetes involving administration of one of the compounds described herein, increased therapeutic benefit may result by also providing the patient with another therapeutic agent for diabetes. In any case, regardless of the disease, disorder or condition being treated, the overall benefit experienced by the patient may simply be additive of the two therapeutic agents or the patient may experience a synergistic benefit.
Specific, non-limiting examples of possible combination therapies include use of the compound of formula (0 with: (a) statin and/or other lipid lowering drugs for example MTP inhibitors and LDLR upregulators; (b) antidiabetic agents, e.g. metformin, sulfonylureas, or PPAR-gamma, PPAR-alphα and PPAR-alpha/gamma modulators (for example thiazolidinediones such as e.g. Pioglitazone and Kosiglitazone); and (c) antihypertensive agents such as angiotensin antagonists, e.g., telmisartan, calcium channel antagonists, e.g. lacidtpine and ACE inhibitors, e.g., enalapril.
In any case, the multiple therapeutic agents (one of which is one of the compounds described herein) may be administered in any order or even simultaneously. If simultaneously, the multiple therapeutic agents may be provided in a single, unified form, or in multiple forms (by way of example only, either as a single pill or as two separate pills). One of the therapeutic agents may be given in multiple doses, or both may be given as multiple doses. If not simultaneous, the timing between the multiple doses may vary from more than zero weeks to less than four weeks.
Suitable routes of administration may, for example, include oral, rectal, transmucosal, pulmonary, ophthalmic or intestinal administration; parenteral delivery, including intramuscular, subcutaneous, intravenous, intramedullary injections, as well as intrathecal, direct intraventricular, intraperitoneal, intranasal, or intraocular injections.
Alternately, one may administer the compound in a local rather than systemic manner, for example, via injection of the compound directly into an organ, often in a depot or sustained release formulation. Furthermore, one may administer the drug in a targeted drug delivery system, for example, in a liposome coated with organ-specific antibody. The liposomes will be targeted to and taken up selectively by the organ.
The pharmaceutical compositions of the present invention may be manufactured in a manner that is itself known, e.g., by means of conventional mixing, dissolving, granulating, dragee-making, levigating, emulsifying, encapsulating, entrapping or compression processes.
Pharmaceutical compositions for use in accordance with the present invention thus may be formulated in conventional manner using one or more physiologically acceptable carriers comprising exctpients and auxiliaries which facilitate processing of the active compounds into preparations which can
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Attorney Docket No. K0091-401-PC
be used pharmaceutically. Proper formulation is dependent upon the route of administration chosen. Any of the well-known techniques, carriers, and excipients may be used as suitable and as understood in the art; e.g., in Remington's Pharmaceutical Sciences, above.
For intravenous injections, the agents of the invention may be formulated in aqueous solutions, preferably in physiologically compatible buffers such as HanJςs's solution. Ringer's solution, or physiological saline buffer. For transmucosal administration, penetrants appropriate to the barrier to be permeated are used in the formulation. Such penetrants are generally known in the art. For other parenteral injections, the agents of the invention may be formulated in aqueous or nonaqueous solutions, preferably with physiologically compatible buffers or excipients. Such excipients are generally known in the art.
For oral administration, the compounds can be formulated readily by combining the active compounds with pharmaceutically acceptable carriers or excipients well known in the art. Such carriers enable the compounds of the invention to be formulated as tablets, powders, pills, dragees, capsules, liquids, gels, syrups, elixirs, slurries, suspensions and the like, for oral ingestion by a patient to be treated. Pharmaceutical preparations for oral use can be obtained by mixing one or more solid excipient with one or more compound of the invention, optionally grinding the resulting mixture, and processing the mixture of granules, after adding suitable auxiliaries, if desired, to obtain tablets or dragee cores. Suitable excipients are, in particular, fillers such as sugars, including lactose, sucrose, mannitol, or sorbitol; cellulose preparations such as: for example, maize starch, wheat starch, rice starch, potato starch, gelatin, gum tragacanth, methylcellulose, macrocrystalline cellulose, hydroxypropylmethylcellulose, sodium carboxymethy I cellulose; or others such as: polyvinylpyrrolidone (PVP or povidone) or calcium phosphate. If desired, disintegrating agents may be added, such as the cross-linked croscarmellose sodium, polyvinyl pyrrolidone, agar, or alginic acid or a salt thereof such as sodium alginate.
Dragee cores are provided with suitable coatings. For this purpose, concentrated sugar solutions may be used, which may optionally contain gum arabic, talc, polyvinyl pyrrolidone, carbopol gel, polyethylene glycol, and/or titanium dioxide, lacquer solutions, and suitable organic solvents or solvent mixtures. Dyestuffs or pigments may be added to the tablets or dragee coalings for identification or to characterize different combinations of active compound doses.
Pharmaceutical preparations which can be used orally include push-fit capsules made of gelatin, as well as soft, sealed capsules made of gelatin and a plasticizer, such as glycerol or sorbitol. The push-fit capsules can contain the active ingredients in admixture with filler such as lactose, binders such as starches, and/or lubricants such as talc or magnesium stearate and, optionally, stabilizers. In soft capsules, the active compounds may be dissolved or suspended in suitable liquids, such as fatty oils, liquid paraffin, or liquid polyethylene glycols. Jn addition, stabilizers may be added. All formulations for oral administration should be in dosages suitable for such administration.
For buccal or sublingual administration, the compositions may take the form of tablets, lozenges, or gels formulated in conventional manner.
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PACE 25,1SS • RCVD AT 1/12/20077:21:37 PM [Eastern Standard Time] * 8VR:USPT0-EFXRF-1/15 • DNIB:2733201 • CSID: • DURATION (mm-ss):31-50
SUBSTTΓUTE SHEET (RLlLE 26) o: TheodosiB Simpkins Page 26 of 55 2007-01-1300:21:39 (GMT) From: LaVβm Hall
Attorney Docket No. K0091-401-PC
For administration by inhalation, the compounds for use according to the present invention are conveniently delivered in the form of an aerosol spray presentation from pressurized packs or a nebuliser, with the use of a suitable propellant, e.g., dichlorodifluoromethane, trichlorofluoromethane, dichlorotetmfluoroethane, carbon dioxide or other suitable gas. In the case of a pressurized aerosol the dosage unit may be determined by providing a valve to deliver a metered amount. Capsules and cartridges of, e.g., gelatin for use in an inhaler or insufflator may be formulated containing a powder mix of the compound and a suitable powder base such as lactose or starch.
The compounds may be formulated for parenteral administration by injection, e.g., by bolus injection or continuous infusion. Formulations for injection may be presented in unit dosage form, e.g., in ampoules or in multi-dose containers, with an added preservative. The compositions may take such forms as suspensions, solutions or emulsions in oily or aqueous vehicles, and may contain formulatory agents such as suspending, stabilizing and/or dispersing agents.
Pharmaceutical formulations for parenteral administration include aqueous solutions of the active compounds in water-soluble form. Additionally, suspensions of the active compounds may be prepared as appropriate oily injection suspensions. Suitable lipophilic solvents or vehicles include fatty oils such as sesame oil, or synthetic fatty acid esters, such as ethyl oleate or triglycerides, or liposomes. Aqueous injection suspensions may contain substances which increase the viscosity of the suspension, such as sodium carboxymethy I cellulose, sorbitol, or dextran. Optionally, the suspension may also contain suitable stabilisers or agents which increase the solubility of the compounds to allow for the preparation of highly concentrated solutions.
A tentatively, the active ingredient may be in powder form for constitution with a suitable vehicle, e.g., sterile pyrogen- free water, before use.
The compounds may also be formulated in rectal compositions such as suppositories or retention enemas, e.g. , containing conventional suppository bases such as cocoa butter or other glycerides.
In addition to the formulations described previously, the compounds may also be formulated as a depot preparation. Such long acting formulations may be administered by implantation (for example subcutaneously or intramuscularly) or by intramuscular injection. Thus, for example, the compounds may be formulated with suitable polymeric or hydrophobic materials (for example as an emulsion in an acceptable oil) or ion exchange resins, or as sparingly soluble derivatives, for example, as a sparingly soluble salt.
A pharmaceutical carrier for the hydrophobic compounds of the invention is a cosolveπt system comprising benzyl alcohol, a nonpolar surfactant, a water-miscible organic polymer, and an aqueous phase. The cosolvent system may be a 10% ethanol, 10% polyethylene glycol 300, 10% polyethylene glycol 40 castor oil (PEG-40 castor oil) with 70% aqueous solution. This cosolvent system dissolves hydrophobic compounds well, and itself produces low toxicity upon systemic administration. Naturally, the proportions of a cosolvent system may be varied considerably without destroying its solubility and toxicity characteristics. Furthermore, the identity of the cosolvent components may be varied: for example, other
23
PAβE 2β»S • ROVD AT 1/12/20077:21:37 PM [Eastern Standard Time] • 8VR:U8PTO-EFXRF-1f15 • DNI8:2733201 * CBID: • DURATION (nim-ss):31.50 o: Thβodosia Simpldnβ Page 27 of 55 2007-01-1300:21:39 (GMT) From: LaVβrπ Hall
Attorney Docket No. K0091-40I-PC
low-toxicity nonpolar surfactants may be used instead of PEG-40 castor oil, the fraction size of polyethylene glycol 300 may be varied; other biocompatible polymers may replace polyethylene glycol, e g., polyvinyl pyrrolidone; and other sugars or polysaccharides maybe included in the aqueous solution.
Alternatively, other delivery systems for hydrophobic pharmaceutical compounds may be employed. Liposomes and emutsions are well known examples of delivery vehicles or carriers for hydrophobic drugs. Certain organic solvents such as N-methylpyrrolidone also may be employed, although usually at the cost of greater toxicity. Additionally, the compounds may be delivered using a sustained-release system, such as semipermeable matrices of solid hydrophobic polymers containing the therapeutic agent. Various sustained-release materials have been established and are well known by those skilled in the art. Sustained-release capsules may, depending on their chemical nature, release the compounds for a few weeks up to over 100 days. Depending on the chemical nature and the biological stability of the therapeutic reagent, additional strategies for protein stabilization may be employed.
Many of the compounds of the invention may be provided as salts with pharmaceutically compatible counterions. Pharmaceutically compatible salts may be formed with many acids, including but not limited to hydrochloric, sulfuric, acetic, lactic, tartaric, malic, succinic, etc. Salts tend to be more soluble in aqueous or other protonic solvents th'on are the corresponding free acid or base forms, Salts useful with the compounds of the present invention include, without limitation, calcium acetate, hydrochloric acid, phosphoric acid, sulfuric acid, sodium hydroxide, potassium hydroxide, magnesium acetate, and p-toluenesulfonic acid salts. The salts can be prepared by contacting the compounds of the invention with an appropriate acid, either neat or in a suitable inert solvent, to yield the salt fomi3 of the invention.
All references, patents or applications, U.S. or foreign, cited in the application are hereby incorporated by reference as if written herein.
GENERAL SYNTHETIC METHODS FOR PREPARING COMPOUNDS The following schemes can be used to practice the present invention.
Scheme I
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PACE 27755 * RCVD AT 1/12/20077:21 :37 PM [Eastern Standard Time) 8VR:U8PTO-EFXRF-1/15 • DM8:2733.01 * CSID: * DURATION (mm-ss):31-50 o: Theodosia Simpkiπs Page 28 of 55 2007-01-1300:21:39 (GMT) From: LaVern Hall
Attorney Docket No. K0091-40 I-PC
Figure imgf000026_0001
Scheme 2
Figure imgf000026_0002
Scheme 3
Figure imgf000026_0003
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PACE 23/55 RCVD AT 1/12/2007 7:21:37 PM [Eastern Standard Time] * SVR:UBPTQ-ΘFXRF-1/15 • DNIB:2733201 • C8ID: * DURATION (mm-ss>:31-50 o: Theodosia Simpldns Page 29 of S5 2007-01-1300:21:39 (GMT) From- LaVsrπ Hall
Attorney Docket No. K0091-401-PC
Scheme 4
Figure imgf000027_0001
The invention is further illustrated by the following examples.
EXAMPLE 1
Figure imgf000027_0002
4-{2-[(S-Etby^-pyrimidin-2-}>l)-(4-trifluoroinetboxy-benzyl)-ainiπo]-e<hylsuiraincιyl)-indaπ-2- carboxylic acid:
Step 1
Figure imgf000027_0003
{2-|(S-£thyl-pyriinid>n-2-yI)-<4-<rinuoroinetboxy-benzyl-ainino|-ethyl}-carb}imic acid tert-butyl estert To a solution of 2-chloro-S-ethyl-pyrimidine (77.6 μL, 0.54 mmol) and triethylamine (333 μL, 2.39 nwjol) in DMSO (10 mL) was added [2-(4-trifluotomethoxy-benzylamino)-ethyl]-carbamic acid /m-bυtyl ester (200 mg, 0.60 mmol). The reaction sol ution was stirred at 150 0C for 24h. The solution was cooled to room temperature, diluted with water (20 mL) and extracted from ethyl acetate (1 x 10 mL). The organic solution was dried (Na2SO4) and concentrated in vacuo. The residue was purified by silica gel
26
PACE 2ββS • RCVD AT 1/12/20077:21:37 PM [Eastern Btaπdard Time] 8VR:U8t>TO«FXRF-1/13 " DNIS:2733201 • C81D: • DURATION (mm-ss):31-50 o: Thβodosia Simpta'πs Page 30 of 55 2007-01-1300:21:39 (GMT) From: LaVern Hall
Attorney Docket No. K009I-40I-PC
chromatography (0-50% ethyl acetate in hexanes) to afford {2-[(5-ethyl-pyrimidin-2-y (Hytrin uoromethoxy-benzy l-amino]-ethy I} -carbamic acid tert-butyl ester (105 mg, 40%) as a yellow oil. 1H NMR (400 MHz, CDCI3) δ 8.77 (s, 2H). 7.25 (d, 2H), 7.12 (d, 2H), 5.20-5.10 (m, IH). 4.58 (S, 2H), 3.72- 3.60 (m, 2H), 3.40-3.30 (m, 2H), 2.48 (q, 2H), 1.38 (s, 9H), 1.20 (t, 3H); LCMS 441.5 (M+1 )-.
Step 2
Figure imgf000028_0001
N'-(5-EfIiyl-pyrimidiiι-2-yl)-N'-(4-(riπuoromethoxy-benzyl)-efhaπe-I^-diamine: To a solution of 20% trifluoroacetic acid (2 mL) in methylene chloride (10 mL) was added {2-[(5-ethyl-pyrimidin-2-yl)-{4- trifluoromethoxy-benzyl-amino]-ethyl}-carbamic acid tert-butyl ester (100 mg, 0.28 mmo!). The reaction solution was stirred at room temperature for 3h. The solution was concentrated in vacuo, diluted with ethyl acetate and washed with IN NaOH. The organic solution was dried (NajSO*) and concentrated to provide Nl-(5-ethyl-pyrimidin-2-yl)-Nl-(4-trif1uoromethoxy-benzyl)-ethane-l,2-diainine (73 mg, 95%) as a yellow oil. 1H NMR (400 MHr, CD3OD) δ 8.30 (s, 2H), 7.36 (d, 2H), 7.23 (d, 2H), 4.96 (s, 2H), 3.86 (t, 2H), 3.18 (t, 2H), 2.55 (q, 2H), 1.23 (t, 3H); LCMS 341.5 (M+iy*.
Step 3
Figure imgf000028_0002
4-<2-|(S-EJhyl-pyriniidin-2-ylH'*-t''iπuorotnethoxy-benzyl)-aminol-e(liylsuiramoyl)-indap-2- carboxylic acid methyl ester: To a solution of 4-chlorosulfonyl-indan-2-carboxyIic acid methyl ester (72 mg, 0.26 mmol) and potassium carbonate (121 mg, 0.88 mmol) in acetonitrile (5 mL) was added N1 -(5- etbyl-pyrimidin-2-yl)-N'-(4-triflιιoromethoxy-benϊyl)-ethane-ll2-diamine (100 mg, 0.29 mmol). The solution was stirred at 50 0C for 4h. The reaction mixture was concentrated in vacuo, diluted with ethyl
27
PACE 3W55 • RCVDAT 1/12/20977:21:37 PM (Eastern Standard TIm-I* SVR:U8PTO-EFXRF.1/15 • DNI8:2733201 • C8ID: • DURATION &nm-ss>:31-50 o: Thaodosia SlmpWns Page 31 of SS 2007-01-1300:21:39 (GMT) From: LaVem Hall
Attorney Docket No. K0091-401-PC
acetate, washed with IN NaOH and concentrated in vacuo. The residue was purified by silica gel chromatography (0-50% ethyl acetate in hexanes) to afford 4-{2-[(5-ethyl-pyrimidin-2-yiχ4- trifluoromcthoxy-bcnzyl)-_ατιino]-cthylsulfarnoyl)-indan-2-carboxylic acid methyl ester (101 mg, 60%) as a tan oil. 1H NMR (400 MHz1 CD3OD) δ 8.50 (s, 2H), 7.60 (d, 1 H), 7.46 (d, 1 H),
1.44-1.36 (m, 2H), 7.35-7 JO (m, 1 H), 7.28-7.24 (m, 2H), 5.01 (s, 2H), 3.80 (t, 2H), 3.66 (s, 3H), 3.58- 3.34 (m.2H), 3.28-3.18 (m, 3H), 2.67 (q, 2H), 1.34-1.20 (m, 5H); LCMS 579.5 (M+ 1 )*.
Step 4
Figure imgf000029_0001
4-{2-|(5-Ethyl-pyrimidin-2-ylH4-triπuoroιnethoxy-beni5'l)-amiπo|-etbylsuirarnoyl)-indan-2- carboxylic acid: To a solution of IN LiOH (200 mg, 0.53 mmol) in THF (4 mL) and methanol (1 mL) was added 4- {2-[(5-ethyl-pyrimidiπ-2-yl)-(4-trifluoromethoxy-benzyl)-aminoJ-ethylsulfBnioyl)-indan-2- csrboxy lie acid methyl ester (100 nig, 0.18 mmol). The solution was stirred at room temperature for 3h. The reaction mixture was concentrated in vacuo, diluted with ethyl acetate, washed with ]N HCI, and concentrated in vacuo. The residue was purified by silica gel chromatography (0-20% MeOH in methylene chloride) to afford 4-{2-[(5-ethyl-pyrimidin-2-yl)-(4-trifluoromethoxy-benzyl)-amino]-ethylsulFamoyl)- iπdan-2-carboxylic aoid (85 mg, 88%) as a tan solid. 1H NMR (400 MHz, CD3OD) δ 8.50 (s, 2H), 7.60 (d, 1H), 7.46 (d, 1H). 7.44-7._-l> (m, 2H), 7.35-7.30 (m, 1H), 7.28-7.24. m, 2H), 5.Ot (s, 2H), 3.80 (t,2H), 3.58-3.34 (m, 2H), 3.28-3.18 (m, 3H), 2.67 (q, 2H), 1.34-1.20 (m, 5H); LCMS 565.5 (M+l)*.
EXAMPLE 2
Figure imgf000029_0002
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Attorney Docket No. K0091-40I-PC
(3-{2-((5-£thy!-pyrimidin-2-yl)-<4-triπuorυιiicthoxy-ben2yl)-amino|-ethylsulfaπioyl)-5-methyI- pheny!)-acetic acid: The compound (3-{2-[(5-ethyi-pyrimidin-2-yl)-(4-trifluoroπiethoxy-beπzyl)-amiπo]- ethylsulfamoyl)-5-methyUphenyl)-acetic acid was prepared according to the procedure outlined in Example I using (3-chlorosulfonyl-5-methyl-phenyl)-βcetic acid methyl ester, 1H NMR (400 MHz, CD3OD) a S.55 (s, 2H), 7.54 (d, 2H), 7.42 (d, 2H). 7.37 (s, I H), 7.28 (d, 2H), 5.05 (s, 2H), 3.84 (t, 2H), 3.72-3.66 (m, 2H), 3.30-3.20 (m, 2H), 2.69 (q, 2H), 2.40 (s, 3H), 1.38-1.20 (m, 3H); LCMS 553.5 (M+l)\
EXAMPLE 3
Figure imgf000030_0001
4-{2-(Pentyl-(4-trinuoroinethoxy-benzyl)-aπiino|-ethylsulfainoyl}-inclan-2-carboxylic acid:
Step 1
Figure imgf000030_0002
J2-(4-TrinuorDinethoxy-beπzylamiπo)-ethyl]-carbamic acid tcrt-butyl ester: To a solution of 4- (trifluoromethc»ty)-benzaldehyde (237 mg, 1.25 mmol) in methylene chloride (30 mL) was added N-(2- aminoethyl)carbamic acid tert-butyl ester (200 mg, 1.25 mmol). After 1 h sodium triacetoxy borohydride (527 mg, 2.50 mmol) was added and the reaction mixture was stirred at room temperature for 4h. The reaction mixture was concentrated, diluted with ethyl acetate, washed with INNaOH and concentrated in vacuo. The residue was purified by silica gel chromatography (0-50% ethyl acetate in hexanes) to afford [2- (4-trifluoromethoxy-benzy(amino)-ethyl]-carbamic acid terf-butyl ester (213 tug, 88%) as a clear oil. 1H NMR (400 MHz, CDCl3) δ 7.34 (d, 2H), 7. J 6 (d, 2H), 4.90 (m, 2H), 3.80 (s, 2H), 3.28-3, 10 (m, 2H), 2.86- 2.70 (m, 2H), 1.45 (s, 9H); LCMS 335.5 (M+ 1)*.
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Attorney Docket No. K0091-401 -PC
Figure imgf000031_0001
{2-(Pcπtyl-(4-tiiflπoroine(hoxy-lκ;πzyl)-amino|-cthyl}-carbaniic acid tert-birtyl ester: To a solution of valeraldehyde (63 mg, 0.60 mmol) in methylene chloride (30 tnJL) was added [2-(4-trifUιoromethoxy- benzylamino)-ethyl]-carbamic acid tørr-butyl ester (200 mg, 0.60 mmol). After Ib, sodium triacetoxy borohydride (252 mg, 1.19 mmol) was added and the mixture was stirred at room temperature for an additional 4h. The reaction mixture was concentrated in vacuo, diluted with ethyl acetate, washed with IN NaOH and concentrated in vacuo. The residue was purified by silica gel chromatography (0-50% ethyl acetate in hexanes) to afford (2-[pentyl-(4-trifluoroτnethoxy-benzy l)-aminoj-ethyl}-carbarnic acid tert- butyl ester (217 mg, 95%) as a clear oil. 1H NMR (400 MHz. CI)CI3)S 7.3 1-7.28 (m, 2H), 7.18-7.10 (m, 2H), 4.88-4.70 (m, 1H), 3.54 (s, 2H), 3.20-3.00 (m, 2H), 2.60-2.52 (m, 2H), 2.50-2.45 (m, 2H), 1.50-1.35 (m, 1 1 H), 1 .30-1.20 (m, 4H), 0.82 (t, 3H); LCMS 405.5 (M+ 1 )+.
Step 3
Figure imgf000031_0002
Λ^-Pentyl-N'-(4-trifluoromethoxy-betιzyl)-ethane-l,2-diamine: A solution of f 2-[pemyl-(4- trifluoromethoxy-benzyl)-amino.]-ethyl} -carbamic acid tert-butyJ ester ( 130 mg, 0.32 mmol) and 20% trifluoroacetic acid (2 mL) in dichloromethane (10 mJL) was stirred at room temperature for 3h. The reaction mixture was concentrated in vacuo, diluted with ethyl acetate and extracted with IN NaOH. The organic solution was dried (Na3SGt) and concentrated in vacuo to provide //-pentyl-N'-(4- trifluoromethoxy-benzyl)-ethane-l,2-diamine (88 mg, 95%) as α clear oil. 1H NMR (400 MHz, CD3OD) δ 7.31 (d, 2H). 7.19 (d, 2H), 3.54 (s, 2H), 2.60-2.52 (m, 4H), 2.50-2.45 (m, 2H), 1.60- 1.55 (m, 2H), 1.30- 1.20 (m, 4H), 0.82 (t, 3H); LCMS 305.5 (M+1)*.
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Attorney Docket No. K.0091-401-PC
Figure imgf000032_0001
4-{2-|Pentyl-(4-trifluoromethoxy-benzyl)-amino|-ethylsuiramoylJ-indajl-2-<:arboxylic acid methyl ester; A solution of 4-chlorosulfonyl-indan-2-carboNylic acid methyl ester (24 mg, 0.088 mmol), /V1- pentyl-N!-(4-uifluoromethoxy-benzyl)-ethaπe-l,2-diamine (30 mg, 0.098 mmol), and potassium carbonate (41 mg, 0.30 mmol) in acetonitrile (30 mL) was heated at 500C for 4h. The reaction mixture was concentrated in vacuo, diluted with ethyl acetate, washed with 1 N NaOH and concentrated in vacuo. The residue was purified by silica gel chromatography (0-50% ethyl acetate in hexanes) to afford 4-{2-[penlyl- (4-trifluoromethoxy-benzyl)-amino]-ethylsuJfamoyl-indan-2-carboxylic acid methyl ester (32 mg, 60%) as a clear oil. 1H NMR (400 MHz, CDCI3) 5 7.68 (d, 1H), 7.42 (d, I H), 7.32-7.24 (m, 3H), 7.20-7.16 (m, 2H), 5.20-S.OO (m, 1 H). 3.74 (s, 3H), 3.50-3.46 (m, 2H), 3.40-3.24 (m, 4H), 2.98 (t, 2H), 2.60-2.50 (m, 2H), 2.34 (t, 2H), 1.46-1.3» (m, 2H), 1.34- 1.14 (m, 5H), 0.88 (t, 3H); LCMS 543.5 (M+!)*".
Step S
Figure imgf000032_0002
4-{2-[Pentjl-(4-triπuoroinethoxy-beπz}'l)-aniint)|-etlιylsulfaιnoj'l}-indan-2-carlκ)xylic acid; To a solution of 4-{2-[peπtyl-(4-trifluoromethoxy-benzyl)-amino]-ethylsulfamoyl}-indan-2-carboxylic acid methyl ester (30 mg, 0.056 mmol) in THF (4 mL), MeOH (I mL) was added IN LiOH (200 μt, 0.16 mmol). The reaction solution was stirred at room temperature for 3h. The reaction mixture was concentrated in vacuo, diluted with ethyl acetate, washed with IN HCl and concentrated in vacuo. The residue was purified by silica gel chromatography (0-20% MeOH in methylene chloride) to afford 4-{2- [pentyl-(4-trifluoromethoxy-benzyl)-amino]-ethylsulfamoyl}-indan-2-carboxylic acid (27 mg, 88%) as a clear oil. ' H NMR (400 MHz1 CD3OD) S 7.72-7.64 (m, 3H), 7.51 (d, 1H), 7.44-7.323 (m, 3H), 4.52-4.40
31
PACE 34(55 * RCVD AT 1/12/20077:21 :37 PM [Eastern Standard Time] * 8VR:U8PTO-EFXRF-1/15 * DNIB:2733201 • CSID: • DURATION (mm-ss):31-50 o: Theodosa SimpWns Page 35 of55 2007-01-1300:21:39 (GMT) From: LaVβrn Hall
Attorney Docket No. K0091-40I-PC
(m, 2H), 3.72 (s, 2H), 3.58-3.50 <m, 2H), 3.48-3.38 (m, 1H), 3.34-3.14 (m, 4H), 1.86-1.70 (m, 2H), 1.44- 126 (m, 6H), 0.92 (t, 3H); LCMS 529.5 (M+l)".
EXAMPLE 4
Figure imgf000033_0001
(3-IV1ethyl-S-{2-|pentyl-(4-trifluorαnietboxy-beπzyl)-amino|-β(hyl$ulfamoyl}-acetic acid: The compound (3-methyl-5-{2-[pentyl-(4-trifluoromethoxy-benzyl)-amino]-ethylsulf8inoyI-8cetic acid was prepared according to the procedure outlined in Example 3 (S-chlorosulfonyl-S-methyl-phenyl^acetic acid methyl ester. 1H NMR (400 MHz, CD3OD) 6 7.72-7.66 (m, 2H), 7.63-7.58 (m, 2H), 7.45-7.38 (m, 3H), 4.48 (s, 2H), 3.71 (s, 2H), 3.32-3.14 (m, 4H).2.46 (s, 3H). 1.84-1.72 (m, 2H), 1.44-1.26 (m, 6H), 0.95 (t, 3H); LCMS 517.5 (M+))*.
EXAMPLE S
Figure imgf000033_0002
(3-{2-|Ethyl-(4-triflnoromethoxy-benzyI)-am'no|-ethylsnlfanioyl}-5-methyl-phenyi>-aceric acid: The compound (3- {2-[ethyl-{4-trifluoromethoxy-benzy l)-aπiino]-ethylsulfamoyl-5-methyl-phenyl)-acetic acid was prepared according to the procedure outlined in Example 3 using acetaldehyde and (3-chlørosulfonyl- 5-methyl-phenyl)-acetic acid methyl ester. 1H NMR (400 MHz, CD3OD) δ 7.74-7.66 (m, 2H), 7.63 <d, 2H), 7.45-7.38 (m, 3H), 4.48 (s, 2H), 3.71 (s, 2H), 3.34-3.20 (m, 6H), 2.42 (s, 3H), 1.38 (t, 3H); LCMS 475.5 (M+ 1)*.
EXAMPLE 6
32
PACE 3H55 • RCVD AT 1/12/20077:21:37 PM [Eastern Standard Time] • SVR:USPTO-EFXRF-1!15 • DNIβ:2733201 • CSID: * DURATION (πtm-ss):31-50 o: Theodosia Simpkins Page 36 of 55 2007-01-1300:21:39 (GMT) From: LaVern Hall
Attorney Docket No. K009M01-PC
Figure imgf000034_0001
(3-{2-|Bulyl-(4-triπιιorometIio>;y-ben7^l)-i»ιπiiio|-e«hyisuirnnκiyl}-5-mcthjl-phcπyl)-acetic acid: The compound (3-{2-[butyl-(4-trifluoroinethoxy-benzyl)-amino]-ethyIsulfamoyl}-5-methyl-phenyl)-acetic acid was prepared according to the procedure outlined in Example 3 using butyraldehyde and (3-chlorosulfonyl- 5-methyl-pheny])-acetic acid methyl ester. ' H NMR (400 MHz, CD3OD) δ 7.72-7.66 (m, 2H), 7.63-7.58 (m, 2H), 7.45-7.38 (m, 3H), 4.48 (S, 2H), 3.71 (s, 2H), 3.32-3.14 (m, 4H), 3.10-3.02 (m, 2H), 2.46 (s, 3H), 1.84-1.72 (m, 2H), 1.44-l.26(m, 2H), 0.95 (t, 3H); LCMS 503.5 (M+l)*.
EXAMPLE 7
Figure imgf000034_0002
4-{2-|But)rl-(4-triπuoromethoxy-beniyl)-aniinoJ-cthylsulfaπioj'l}-iπdan-2-carboxylic acid: The compound 4-{2-[butyl-<4-trifluoromethoxy-berιzyl)-aπiino]-ethylsulfanioyl}-indan-2-carboxylic acid was prepared according to the procedure outlined in Example 3 using butyraldehyde. 1H NMR (400 MHz, CD3OD) δ 7.72-7.64 (m, 3H), 7.51 (d, 1 H), 7.44-7.323 (m, 3H), 4.48 (s, 2H), 3.58-3.50 (m, 2H), 3.48-3.38 (m, 1H), 3.34-3.24 (m, 6H), 3.18-3. LO (m.3H), 1.86-1.70 (m, 2H), 1.44-1.26 (m, 2H), 0.98 (t, 3H); LCMS 515.5 (M+ 1 )+.
EXAMPLE 8
Figure imgf000034_0003
33
PACE 36/55 ' RCVD AT 1/12/20077:21 :37 PM [Eastern Standard Time] • 8VR:USPTO-EFXRF-1/15 DNI8:2733201 • CBID: * DURATION (mm-ss):31-S0 4-{2-(Ethyl (4yl-trii)υoroιneiboxy-benzyl)-amino|-βtlιyUulfamoyl}-indan-2-carboxylic acid; The compound 4-{2-[ethyl-(4-trifIuoromethoxy-ben2yl)-amiπo]-ethyIsulfaiiioyl}-indan-2-carboxylio acid was prepared according to the procedure outlined in Example 3 using acetaldehyde. 1H NMK (400 MHz, CD3OD)S 7.72-7.64 (m, 3H), 7.51 (d, 1 H), 7.44-7.323 (m, 3H), 4.46 (s, 2H), 3.58-3.50 (m, 2H), 3.48-3.38 (m, 2H)1 3.34-3.20 (m, 7H), 1.37 (t, 3H); LCMS 487.5 (M+l )\
EXAMPLE 9
Figure imgf000035_0001
4-(N-(2-(4-Aceiyl-3-hydroxy-2-propylphenoxy><!thyl)-N-methylsuiraιnoyl)-2>3-dihydrc>-1H-indene-2- carboxylic acid:
Step 1
Methyl 4-(N-(2-hydroxyethyl)-N-methylsniramoyl)-2r}-dihydro-l H-indeπe-2-cnrboxytate: 2-
(Methylamino)ethanol (0.35 mL, 4.33 mmol) and DMAP (20 mg, 0.16 mmol) were sequentially added to a solution of methyl 4-(chlorosulfonyl)-2,3-dihydro-l H-indene-2-carboxylate (900 mg, 3.28 mmol), triethy lamine ( 1.5 mL, 1 1 mmol), and THF (30 mL) at room temperature under Nj. After 1 h, the reaction was poured into IN HCl (100 mL) and extracted with dichloromethane (100 mL x 2). The combined organic extracts were combined, dried, filtered, concentrated in vacuo, and purified by silica gel chromatography (3:2— • 1 :4; hexanes:ethyl acetate) to give methyl 4-(N-(2-hydroxyelhyl)-N- methy lsu lfamoy l)-2,3-dihydro- 1 H-indene-2-carboxy late.
Step 2
Methyl 4-(N-(2-(4-acetyl-3-hydroxy-2-propylpheπoxy)ethyi>N-metliylsαiraαioyl)-23>dihydro-1H- indenε-2-carboxylate: Triphenylphosphine (265 mg, 1 mmol) and di-tøft-bulylazodicarboxylate (230 mg, 1 mmol) were sequentially added to a solution of methyl 4-(N-(2-hydroxyethyl)-N-methylsulfamoyl)-2,3- dihydro-1 H-indene-2-carboxylate (157 mg, 0.5 mmol), l-(2,4-dihydroxy-3-propylphenyl)ethaπσne (150 mg, 0.77 mmol) and THF (4 mL). After 22h, the reaction was concentrated and purified by silica gel chromatography (4:1— »3:2; hexanes:ethy1 acetate) to give methyl 4-(N-(2-(4-acetyl-3-hydroxy-2- propylphenoxy)ethyl)-N-methylsulfamo.yl)-2,3-dihydro-l H-indene-2-carboxylate: MS (ESI): 490.0 (M+H).
Step 3 o: Thaodosia SimpWnB Page 38 of SS 2007-01-1300:21:39 (GMT) From: LaVβrn Hall
Attorney Docket No. K009I-40I-PC
4-(N-(2-(4-Acetyl-3-hydrι>xy-2-propylphenoxy)ethyl)-N-methylsuir3moyl)-2^-dihydro-1H-indene-2- carboxylic acid: The title compound was prepared from methyl 4-(N-(2-(4-acetyl-3-hydroxy-2- propylphenoxy)ethyl)-N-melhylsulfamoyl)-2J-dihydro-1H-indene-2-carboxylate following the procedure outlined in Example 1, Step 4. 1HNMR (400 MHz, DMSO-d6): δ 12.81 (s, I H), 12.39 (or s, 1H), 7.79 (d, 1H), 7.56 (d, lH), 7.52 (d, I H), 7.37 (1, 1H), 6.62 (d. 1H), 4,21 (t, 2H), 3.50 (1, 2H), 3,46-3.1 1 (m, 5H), 2.84 (s, 3H), 2.57 (s, 3H), 2.53 (t, 2H), 1.43 (m. 2H), 0.85 (t, 3H); MS (ESI): 476.0 (M+H).
EXAMPLE 10
Figure imgf000036_0001
6-(N-(2-(4-Acetyl-3-hydroxy-2-propylpheιioxy)ethyl)-N-metbylsulfamoyl)-23-dihydro-1H-lndene-l- carboxylic acid: The title compound was prepared from methyl 6-(chlorosulfony))-2,3-dihydro- 1H- indene-1-carboxylate following the procedure outlined in Example 9. 1H "NMR (400 MHz, DMSO-d6): δ 12.81 (s, 1H), 12.61 (br s, 1 H), 7.81 (d, 1H), 7.75 (s, 1H), 7.65 (d, 1 H), 7.49 (d, 1 H), 6.63 (d, 1 H), 4.22 (t, 2H), 4.10 (t, 1H). 3.38 (m, 2H), 3.08-2.88 (m, 2H), 2.80 (s, 3H), 2.59 (s, 3H), 2.53 (t, 2H), 2.39-2.25 (m, 2H), 1.44 (m, 2H), 0.86 («, 3H); MS (ESI): 476.0 (M+H).
EXAMPLE II
Figure imgf000036_0002
4-(N-(2-{4-Acetyt-3-lιydro)cy-2-propylplieπoxy)ethyl)sulfamoyl)-2,3-dihydro-1H-indene-2-carboxylic acid;
Step 1
Methyl 4-sulfamoyl-2-3-dihydro-1H-indene-2-CBrboxylate: Ammonia (3.5 mL, 2M in methanol, 7 mmol) was added to a solution of methyl 4-(chlorosulfonyl)-2,3-dihydro-lH-indene-2-carboxylate (825 mg, 3 mmol) and dichloromethane (15 mL) at room temperature. After 1.5 h, the reaction was concentrated in vacuo and purified by silica gel chromatography (7:3-*2:3; hexanesxthyl acetate) to give methyl 4- sulfamoyl-2,3-dihydro-l H-iπdeπe-2-carboxylate: MS (ESI): 255.9 (M+H).
35
PACE 38K5 * RCVD AT 1/12K007 7:21:37 PM [Eastern Standard TlmeJ" SVR:USPTO-EFXRF-1/15 > DNIB:2733201 * CSID: * DURATION (mm-ss):31-5O o: Thθαdosia Slmpldns Page 39 of 55 2007-01-13 00:21:39 (GMT) From: LaVβrn Hall
Attorney Docket No. K.0O9I-4OI-PC
Step 2
Methyl 4-<!\-(2-(4-acetyl-3-hydroxy-2-propylphenoxy)ethy0sulfaιπoyl)-2v3-ιlihydro-1H-indene-2- carboxylate: A mixture of methyl 4-sulfwnoyl-2-3-dihydro- lH-mdene-2-carboxylate (270 mg, I . I mmol), l-(4-(2-bromoethoxy)-2-hydroκy-3-propylphenyl)ethanone (320 mg, 1.1 mmol), cesium carbonate (550 mg, 1.7 mmol) and DMF (4 roL) was stirred at room temperature under N3, After 14 h, the reaction was diluted with 0.! N HCI (40 mL) and extracted with dichloromethane (40 rtiL x 2). The combined organic extracts were dried, filtered, concentrated, and purified by silica gel chromatography (4:1— v3:2; hexanesiethyl acetate). Further purification by reverse-phase HPLC (1 : 1— >0: 1 ; wateracetonitrile) gave metbyJ 4-(N-(2-(4-ocetyl-3-hydroxy-2-ρropylphenoxy)ethyl)sulfamoyl)-2,3-dihydrc-lH-indene-2- carboxylate: MS (ESl): 476.0 (M+H).
Step 3
4-(N-(2-(4-Acetyl-3-hydroxy-2-propylphenoxy)ethyl)sulfamoyl)-2,3-<lihydro-JH-iodene-2-carboxylic acid: The title compound was prepared from methyl 4-(N-(2-(4-acetyl-3-hydroxy-2- propy lphenoxy)ethyl)sulfamoyl)-2,3-dihydrcf- 1 H-indene-2-carboxylate following the procedure outlined in
Example I, Step 4. 1H NMR (400 MHz, DMSO-d6): δ 12.81 (s. 1 H), 7.96 (t, 1 H), 7.76 (d, 1 H), 7.60 (d, 1H), 7.47 (d, 1H), 7.33 (t, lH), 6.52 (d, I H), 4.03 (m, 2H), 3.56-3.26 (m, 3H), 3.16 (m, 4H), 2.57 (s, 3H),
2.S0 (m, 2H), 1.42 (m, 2H), 0.83 (t, 3H); MS (ESI): 461.9 (M+H).
EXAMPLE 12
Figure imgf000037_0001
5-(N-(2-(4-Ace1yl-3-Iiydroxy-2-propylphenoxy)ethyl)sulfamoyl)-23-dihydro-1H-indene-2-carboxylic acid: The title compound was prepared from methyl 5-(chlorosulfony l)-2,3-dihydro- 1 H-indene-2- carboxylate following the procedure outlined in Example 1 1. 1H TvJMR (400 MHz, DMSO-d6): δ 12.81 (s, 1H), 7.87 (1, 1H), 7.77 (d, l H), 7.64 (s, 1H), 7.60 (d, 1H), 7.39 (d, 1H). 6.53 (d, 1H), 4.04 (t, 2H), 3.3] (m, 1 H), 3.15 (m, 6H), 2.57 (s, 3H), 2.53 (t, 2H), 1.43 (m, 2H), 0.84 (t, 3H); MS (ESI): 462.0 (M+H).
EXAMPLE 13
36
PACE 39/55 * RCVD AT 1/12/20077:21:37 PM (Eastern Standard Time] SVR:USPTO-ΘFXRF-1M5 • DNIB:27332O1 • CGlD: * DURATION (mm-ss):31-S0
Figure imgf000038_0001
5-(N-(2-(4-Acetyl-3-hydroxy-2-propylphenoxy)ethyl)-N-methysulfamoyl)-2,3-dihydro-1H-indene-2- carboxylic acid:
Step I
Methyl 5-(N-methylsulfamoyl)-2,3-dilrydro-1H-indene-2-carboxylate: Methylamine (9 mL, 2M in THF, 18 mmol) was added to a solution of methyl 5-(chlorosulfonyl)-2,3-dihydro-1H-indene-2-carboxylate (1..6 g, 5.8 mmol) and dichloromethαnβ (20 mL) at room temperature. After 15 min, the reaction was concentrated and purified by silica gel chromatography (7:3— »2:3; heκanes:ethyl acetate) to give methyl 5- (N-methy lsulfamoyl)-2,3-dihydro- 1 H-indene-2-carboxylate.
Step 2
5-<N-(2-(4-Acelyl-3-hydroxy-2-propylρhenoxy)ethyl)-N-methylsulfamoyl )-2,3-dihydro-1H-indene-2- carboxylic acid: The title compound was prepared from methyl 5-(N-methylsulfamoyl)-2,3-dihydro-1H- indene-2-carboxylate following the procedure outlined in Example 11. 1H NMR (400 MHz, DMSOd6): 6 12.81 <s, 1H), 7.81 (d, 1H), 7.65 (s, 1 H), 7.59 (d, I H), 7.45 (d, 1H), 6.63 (d, 1H), 4.21 (t, 2H), 3.41 (t, 2H), 3.36-3.12 (m, 5H), 2.81 (s, 3H), 2.59 (s, 3H), 2.53 (t, 2H), 1.44 (m, 2H), 0.86 (t, 3H); MS (ESl): 476.0 (M+H).
EXAMPLE 14
Figure imgf000038_0002
4-(N-metliyl-N-(2-(7-propyl-3- (trifluoromethyl )benio[d]isoxazol-6-ylory)ethyl)sulfainoyl)-2,3- dihydro-1H-indene -2-cnrboxylic acid: The compound 4-(N-methyl-N-(2-(7-propyl-3- (trifluoromethyl)benzofd]isoxazol-6-y loxy)ethyl)sulfamoyl)-2,3-dihydro-1H-indene-2-carboxylic acid was prepared from methyl 4-(chlorosulfonyl)-2,3-dihydro-1H-indene-2-carboxylatc aπd 7-propyl-3- (trifluoromethyl)benzo[d]isoxazol-6-ol following the procedure outlined in Example 9. 1HNMR (400 o- Theαdosa Simplάns Page 41 of 55 2007-01-1300:21:39 (GMT) Fraπv LaVβm Hall
Attorney Docket No. K0091-401-PC
Mhk, DMSO-d6): S 7.75 (d, I H), 7.57 (d, I H), 7.51 (d, I H), 7.36 (t, 1 H), 7.34 (d, I H), 4.30 (t, 2H), 3.55 (t, 2H), 3.50-3.10 (m, 5H), 2.85 (m, 5H), 1.62 (m, 2H), 0.88 (t, 3H); MS (ESI): S27.5 (M+H).
EXAMPLE 15
Figure imgf000039_0001
4-(fV-(2-(di-t>-tolylinethylencaιninι>oxy)ethyl)-N-ιιicthylsulfaπiov))-23-dihvJro-lH-indcne-2- carborylic acid:
Step I
Figure imgf000039_0002
Methyl 4-(N-{2-(di-p-toi}'linethyleneamiπooxy)ethyl)-N-methylsulfaιnoyl)-23-difay<iro-1H-indene-2- carboxylate: 4-[(2-bromo-ethyt)-methyl-sulfamoyπ-indan-2-carboxylic acid methyl ester (101 mg, 0.27 mmol), di-p-tolyt-methβnoπe oxime (90 mg, 0.40 mmol), TBAI (15 mg, 15 mol %) and potassium carbonate (1 15 mg, 0.83 mmol) were mixed in DMF (3 mL). The reaction was stirred at room temperature for 2h then heated to 1000C for 0.5 h. The mixture was poured into water and extracted with ethyl acetate, dried (Na2SO^), filtered and concentrated. The product was purified by silica gel chromatography (0-30 % EtOAc in Hexanes) to afford methyl 4-(N-(2-(di-ρ-tolylmethyleneaminoox>')ethyl)-N-methylsulfamoyl)- 2,3-dihydro- lH-indene-2-corboxylate (35 mg, 25 %) as a clear oil. 1H NMR (400 MHz, CDCi3) δ 7.61 (d, 1H), 7.39 (d, 1 H), 7.34 (d, 2H), 7.26 (t, 1 H), 7.12 (d, 2H), 4.33-4.28 (m, 2H), 3.70 (s, 3H), 3.65-3.61 (m, 1H), 3.53-3.45 (m, 3H), 3.38-3.21 (m, 4H), 2.79 (s, 3H), 2.39 (s, 3H), 2.35 (s, 3H). LCMS: 521.0 (M+l )+.
Figure imgf000039_0003
38
PACE 41A55 * RCVD AT 1/12/20077:21:37 PM [Eastern Standard Tims] * 8VR:U8PTO-EFXRF-1/15 " DNIS:2733201 * C8ID: * DURATION (mπvss):31.50 o: Thβodosia SimpWπs Page 42 of 55 20O7-01-1300:21:39 (GMT) From: LaVem Hall
Attorney Docket No. K0091-40I-PC
4-{N-(2-(Di-p-tol)'Inietbj'l«neaininooxy)etbyl)-N-methylsulfamoyl)-2^-dihj'dro-1H-iodene-2- carboxylic acid; 1 M JLiOH (1 mL) was added to methyl 4-(N-(2-(di-p-tolylmethyleneaminooxy)ethyt)-N- methy lsulfamoyl)-2,3-dihydro- 1 H-indene-2-carboxylate (35 mg, 0.067 mmol) in THF (4 mL) and methanol (1 mL). The reaction was stirred for 3h at room temperature and then quenched with DOWEX 50WX4-50 (l-T Form) until the solution is neutral (pH paper). The solution was filtered, concentrated and purified by silica gel chromatography (0-20 % MeOH in dichloromethane) to afford 4-(N-(2-(di-p- tolylmethy leneaminooxy)ethyl)-N-methylsulfarrκ>y l>2,3-dihydro- 1 H-indene-2-carboxy lie acid ( 19 mg, 56%) as a clear oil. LCMS: 507.0 (M+l )*.
EXAMPLE 16
Figure imgf000040_0001
2-(2-(N- (2-(bis(4-(TrinuoromethyJ)pbeπyl)metbyleneamiπoox)')e«hyl)-Λ'-methylsulfamoyl>6- methylpbenyl)acetic acid:
Step )
Figure imgf000040_0002
tert-Butyl 2-(l,3-dioxoist>indoJiπ-2-yloxy)ethyl(mr<hyl)carbamate: 2-(Methylamino)ethanol (10.0 g, 133.1 mmol), triethylamine (55 mL, 394.6 mmol), and BoC2O (18 mL, 78.4 mmol) were mixed in DMF (50 mL). The reaction was stirred at room temperature for 1 h then dry loaded on SiO. and purified by flash chromatography to afford tert-bulyl 2-hydroxyethyl(methyl)carbamate (10.85 g). tert-Butyl 2- hydroxyethyl(methyl)carbamate (10.85 g, 61.9 mmol) was then dissolved in THF (500 mL). To this solution was then added triphenylphosphine (18.20 g, 69.4 mmol), Λ/-hydroxyphthalamide (12.13 g, 74.4 mmol) and di-tert-butyl azodicαrboxylate (19.50 g, 84.7 mmol) at 0 "C. The reaction mixture was lhen stirred for an additional 2.5 h at 0 CC, concentrated on SiO; and purified by silica gel chromatography (0-50 % EtOAc in Hexanes) to afford tert-butyl 2-(l,3-dioxoisoiπdoliπ-2-yloxy)ethyl(methyl)carbamate (11.17 g, 56 %) as a yellow oil. 1H NMR (400 MHz, CDCl3) δ 7.83-7.8 J (m, 2H), 7.78-7.73 (m, 2H), 4.40-4.25 (m, 2H), 3.65-3.55 (m, 2H), 3.02 (br s, 3H), 1.44 (br s, 9H).
39
PACE 42/55 • RCVD AT 1/12/20077:21 :37 PM [Eastern Standard Time] ' 8VR:UePT0-EFXRF-1/15 • DNIS;2733201 * C8ID: DURATION (mm-ss>:31-50 o: Theodosia SlmpWπs Page 43 of SS 2007-01-13 00:21:39 (GMT) From: LaVern Hall
Attorney Docket No. KQ09I-401-PC
Step 2
Figure imgf000041_0001
Bis-<4-(irifluoroini;<hyl)plienyl)metlianonc: COHCO)« wa$ added to a solution of l-ιodo-4- (trifluoromethyl)benzene (2.50 g, 9.2 mmol) in CH3CN (17 mL). Using a microwave reactor (biotage) the reaction was heated to 130 0C for 10 seconds. The reaction was filtered through eel he, concentrated, dry loaded on SiO3 and purified by silica gel chromatography (0-30 % EtOAc in Hexanes) to afford bis-(4- (trifluoromethyi)pheny l)methanone (J .13 g, 61 %) as an off white solid. 1H NMR (400 MHz, CDCl3) δ 7.91 (d, 4H), 7.79 (d, 4H).
Step 3
Figure imgf000041_0002
tert-Butyl-2-(bis(4-(triπuoromethy0phenyl)methyleπeaniinooxy)e«hyl(rπethyl) carbamate: Hydrazine monohydrate (240 μL, 4.9 mmol) was added to a solution of tert-butyl-2-(1,3- dioxoisoindolin-2-yloxy)etbyl(methyl)carbamate (1.0 g, 3.1 mmol) in EtOH (15 mL) at room temperature. When the deprotection was complete by TLC, the mixture was concentrated to afford an off-white solid which was then extracted with diethyl ether. The ether solution was then filtered and concentrated to provide crude ten-butyl 2-(aminooxy)ethyi(methyl)carbamate (600 mg) as a yellow oil. The crude tert- butyl 2-(aminooxy)ethyl(methyl)carbBmate (219 mg, 1.15 mmol) and bis(4-
(trifluoromethyl)phenyl)methanone (440 mg, 1.4 mmol) were mixed in MeOH (3 mL). To this mixture was added solid NaOH (6 equiv) which was followed by stirring for 30 min at 70 °C. The reaction mixture was diluted with EtOAc and washed with water, brine, dried with sodium sulfate, filtered, concentrated and purified by silica gel chromatography (0-30 % EtOAc in Hexanes) to afford tert-butyI-2-(bis(4- (trifluoromethyl)phenyl)methyleneamiπooxy)ethyl(methyl) carbamate (270 mg, 48 %) as a white solid. 1H NMR (400 MHz, CDCI3) δ 7.23-7.71 (m, 2H), 7.62-7.56 (m, 4H), 7.49-7.42 (m, 2H), 4.35-4.25 (m, 2H), 3.55-3.49 (m.2H), 2.80 (s, 3H), 1.41 (br s, 9H); LCMS: 49I.4 (M+ I)*.
Step 4
40
PACE 4Λ55 • RCVD AT 1/12/20077:21:37 PM [Eastern Standard Time] • SVR:USPTO-EFXRF-1/15 * DNIB:2733201 ' CSID: • DURATION (mm-ss):31-50 o: Thβodoεia Simpldπs Page 44 of 55 2007-01-1300:21:39 (GMT) From: LaVβm Hall
Attorney Docket No. K0091-401-PC
Figure imgf000042_0001
Methyl 2-(5-(M(2-(bis(4-(trifIuorome«l)yl)phcnjl)nictIiyleneainiaooxy)ethyl)-vV-meth}lsulfainoy()- 2- metliylμlrcuyl)acctat<j: A solution of tert-butyl-2-(bis(4
(trifluoromethy l)pheπyl)meιhyleneaminooxy)ethyl(metbyl)c«rbamate (127 mg, 0.26 mmol) in 10 % TFA/dichloromethane (2,5 mL) was stirred for 1 h. The reaction mixture was concentrated in vacuo and dissolved in THF (2 mL). To this solution was added triethylamine (200 μL, 1.43 mmol), methyl 2-{5- (chlorosulfonyl)-2-methy IphenyQacetate (86 mg, 0.33 mmol) and DMAP (cat). The mixture was stirred at room temperature for 30 min, concentrated in vacuo and purified by silica gel chromatography (0-30 % EtOAc in Hexanes) to afford methyl 2-(5-{Λf-(2-{bis(4-(trifluoromethyl)phenyl)methylene8rninooxy)ethyl)- iV-meιhylsulfamoyl)-2-methylphcπyl)acetate (70 mg, 48 %) as a clear oil. ' H NMR (400 MHz, CDCI3) 5 7.7 J (d, 2H), 7.61-7.55 (m, 6H), 7.47 (d, 2H), 7.30 (d, IH), 4.36 (t, 2H), 3,69 (s, 5H), 3.35 (t, 2H), 2.69 (s, 3H), 2.36 (s, 3H); LCMS: 617.4 (M÷iy,
Step 5
Figure imgf000042_0002
2-(2-(Ar-(2-(bis(4-(Trifluoromethyl)pfaenyl)me(hyleneainiaooxy)etbyI)-JV-fnethylsulfamoy])-6- tøethylpbenyQacctic acid: The compound 2-(2-(iV-(2-(bis(4-
(trifluoromethyl)phenyl)methyleneaniinooxy)ethyl)-Λr-melhylsulfanwyl)-6-methylphenyl)acetic add was prepared from methyl 2-(5-(/V-(2-(bis(4-(trifluoromcthyl)phenyl)methyleneaminooxy)ethyl)-Λ'- methy!sulfamoyl)-2-methylphenyl)acetate according to the procedure outlined in Example 15, Step 2 . 1H NMR(400 MHz, CD3OD) δ ppm.7.78 (d, 2H), 7.69-7.63 (m, 5H), 7.58-7.54 (m, 3H), 7.37 (d, 1H), 4.34 (t, 2H), 3.73 (9, 2H), 3.35 (t, 2H), 2.67 (s, 3H), 2,36 (s, 3H). LCMS: 603.4 (M+l)"
EXAMPLE 17
41
PACE 44MS • RCVD AT 1/12/20077:21:37 PM [Eastern Standard Tims] • βVB:USPTO-EFXRF-1rt5 • DNIS:2733201 * CSID: * DURATION <mm-ss):31-50
Figure imgf000043_0001
2-(2-(N-(2-(bis(4-(Trifluoromethhoxy)phenyl)methyleneaminooxy)ethyl)- N- metbylsulfamoyl)-6-niethylpheπyl)acetic acid: The title compound was prepared following the procedure outlined in Example 16 using bis-(4-(trrifluoromethoxy)phenyl)tnethanone. 1H NMK (400 MHz, CD3OD) δ 7.64 (d, 1 H). 7.59-7.54 (m, 3H), 7.47-7.44 (m, 2H), 7.38-7.35 (m, 3H), 7.2S (d, 2H), 430 (t, 2H), 3.73 (s, 2H), 3.35 (I, 2H). 2.67 (s, 3H), 2.37 (s, 3H). LCMS: 635.3 (M+1 f.
EXAMPLE 18
Figure imgf000043_0002
4-(N- (2-(bis(4-(trifluoromethyl )phenyl)methyleneaminooxy)ethyl)-N- methylsuiraraoyl)-2,3-dibydro- 1H-indene-2-earbosylic acid: The title compound was prepared following the procedure outlined in Example 16 using methyl 4-(chlorosulfonyl)-2,3-dihydro- 1 H-indene-2-carboxylate. 1H NMR (400 MHz, CD3OD) δ 7,78 (d, 2H), 7.69-7.54 (m, 7H), 7.46 (d, 1H), 7.31 (t, 1H), 4.33 (t, 2H), 3.57-3.44 (m, 4H), 336- 3.30 (m, 1H), 3.25-3.23 (m, 2H), 2.74 (s, 3H). LCMS: 6J5.4 (M+l)'.
EXAMPLE 19
Figure imgf000043_0003
4-(N- (2-(bis(4-(trifluoromethoxy)phenyl)methylencaminooxy)ethyl)-N- methylsulfamoyl)-2,3-dibydro- 1H-indeπe-2-carboxylic acid: The title compound was prepared following the procedure outlined in Example 16 using bis-(4-(trifluoromethoxy)phenyl)methanone and methyl 4-(chlorosulfonyl)-2,3-dihydro- o: Thβodosla SimpHπs Page 4β of 55 2007-01-1300:21 :39 (GMT) From: LaVβm Hall
Attorney Docket No. K0091-40I-PC
1 H-iπdeπe-2-carboxylate. 1H NMR (400 MHz, CD3OD) S 7.59-7.53 (m, 3H), 7.47-7.44 (m, 3H). 7.37-7.26 (m, 5H), 4.30 (t, 2H), 3.58-3.42 (m, 4H), 3.36-3.30 (m, IH), 3.25-3.23 (m, 2H), 2.74 (s, 3H). LCMS: 647.4 (M+ 1 )*.
EXAMPLE 20
Figure imgf000044_0001
2-(2-(/V-(2-(di-p-tolylme-hylenesmlπooxy)ethyl)-Λ^methylsulfamoyl)-6-methylphenyl)acetic acid: The title compound was prepared following the procedure outlined in Example 16 using bis-(4- (methyl)phenyl)methaπone. 1H NMR (400 MHz, CD5OD) δ 7.63 (d, I H), 7.57 (m, 1 H), 7.36 (d, 1 H), 7.30 (d, 2H), 7.24-7.13 (m, 6H), 4.24 (t, 2H), 3.72 (s, 2H), 3.32 (t, 2H), 2.66 (s, 3H), 2.38 (s, 3H)12.36 (s, 3H), 2.34 (s, 3H). LCMS: 495.5 (M+ 1)".
The compounds in examples 1-20 have been shown to be PPAR modulators by the following essay.
Biological Activity Assay
Compounds may be screened for functional potency in transient tπmsfection assays in CV-I cells for their ability to activate the PPAR subtypes (transactivαtion assay). A previously established chimeric receptor system was utilized to allow comparison of the relative transcriptional activity of the receptor subtypes on the same synthetic response element and to prevent endogenous receptor activation from complicating the interpretation of results. See, for example, Lehmann, J. M.; Moore, L. B.; Smith-Oliver, T. A; Wilkinson, W.O.; Willson, T. M.; Kliewer, S. A., An antidiabetic thiazolidinedione is a high affinity ligand for peroxisome proliferator-activated receptor S (PP ARS), J. Biol. Chem., 1995, 270, 12953-6. The ligand binding domains for murine end human PPΛR-alpha, PPAR-gomma, and PPAR-delta are each fused to the yeast transcription factor GAL4 DNA binding domain. CV-I cells were transiently transfected with expression vectors for the respective PPAR chimera along with a reporter construct containing four or five copies of the GAL4 DNA binding site driving expression of luciferase. After 8-16 h, the cells are replated into multi-well assay plates and the media is exchanged to phenol-red free DME medium supplemented with 5% delipidated calf serum. 4 hours after replating, cells were treated with either compounds or I %
43
PΛOE 46S5 • HCVD AT 1/12/20077:21:37 PM [Eastern Standard Time]" SVR:U8PTO-EFXRF-1/15 DNIB:2733201 • CSID: • DURATION (mm-ss):31-50 o: Theodαsia Simpkins Page 47 of SS 2007-01-1300:21:39 (GMT) From: LaVern Hall
Attorney Docket No. K.0091-401-PC
DMSO for 20-24 hours. Luciferase activity was then assayed with Britelite (Perkin Elmer} following the manufacturer's protocol and measured with either the Perkin Elmer Viewlux or Molecular Devices Acquest (see, for example, Kliewer, S. A., et. al. Cell 1995, 83, 813-819). Rosiglitazone is used as a positive control in the PPARδ assay, Wy~l4643 and GW7647 is used as a positive control in the PPARδ assay. GW50I5I6 is used as the positive control in the PPARδ assay.
Examples I -20 were assayed to measure their biological activity with respect to their efficacy for modulating PPAR-alpha, PPAR-gamma, and PPAR-ddta. EC50 values arc set forth below in Table I .
Table 1. Biological Activity
Figure imgf000045_0001
From the foregoing description, one skilled in the art can easily ascertain the essential characteristics of this invention, and without departing from the spirit and scope thereof, can make various changes and modifications of the invention to adapt it to various usages and conditions.
44
PACE 47/55 ' RCVD AT 1H2/20O77:21:37 PM [Eastern Standard Time] * SVR:U&PTO-EFXRF-1/15 • DNIβ:2733201 ' CBID: * DURATION (mm-ss):31-50

Claims

o: Thβodosia SimpWns Page 48 of 55 2007-01-1300:21:39 (GMT) From: LaVβm Hall
Attorney Docket No. K0091-401-PC
WE CLAIM:
I . A compound having structural Formula (I)
Figure imgf000046_0001
wherein:
A is selected from the group consisting of aryl, heteroaryl, cycloalkyl, and hetcrocycloalkyl, any of which may be optionally substituted;
R12 is selected from the group consisting of hydrogen, lower alkyl, lower alkenyl, lower heteroalkyl, and lower alkoxy; R12 may join together with a carbon atom in G1 to form a five to eight-membered carbocycle or heterocycie, having structural Formula (II):
Figure imgf000046_0002
B is a saturated, partially saturated, or unsaturated hydrocarbon chain, optionally containing one or more heteroatαms, to form an optionally substituted five- to eight- membered carbocycle or heterocycie; T is -C(O)OH;
Figure imgf000046_0003
; n is 1 to 4;
R' and R3 are each independently selected from the group consisting of hydrogen, halogen, lower alkyl, loweralkoxy, and lower perhaloalkyl;
G2 is -Y(CR3RVV(CR3R4)-, -;
Y is S, -SO2N(R3)- or NR6;
W is O or -NR4; p is 2; m is 0, I or 2;
R3 and R4 are each independently selected from the group consisting of hydrogen, halogen, hydroxy, optionally substituted lower alkyl, optionally substituted lower alkoxy, optionally substituted heteroalkyl, optionally substituted cycloalkyl, lower perhaloalkyl, lower perhaloalkoxy, nitro, cyano, NH1, and -C(O)OR";
R1 ' is selected from the group consisting of hydrogen and optionally substituted lower alkyl;
45
PACE 48/55 • RCVO AT -U12/20077:21:37 PM [Eastern Standard Time] * SVR=USPTO-EFXRfMM 5 * ONIB: -733201 C8ID: * DURATION (mm-ss):31-.O o: Theodosa SimpWns Page 49 of 55 2007-01-1300:21:39 (GMT) From: LaVβrn Hall
Attorney Docket No. K009I-401-PC
R and R6 ere each independently selected from the group consisting of hydrogen, optionally substituted lower alkyl, optionally substituted lower alkenyl, optionally substituted lower alkynyl, optionally substituted heteroalkyl, optionally substituted aryl, and optionally substituted heteroaryl;
G3 is selected from the group consisting of optionally substituted aryl, optionally substituted heteroaryl, optionally substituted cycloalkyl, optionally substituted cycloheteroalkyl, and -N=C(R7R4); and
R7 and R9 are each individually selected from the group consisting of hydrogen, optionally substituted aryl, optionally substituted heteroaryl, optionally substituted cycloalkyl, and optionally substituted cycloheteroalkyl.
2, The compound as recited in Claim I wherein:
R3 and R4 are each hydrogen.; and
Figure imgf000047_0001
3. The compound as recited in Claim 2 wherein:
A is optionally substituted phenyl;
R12 is hydrogen; and
R1 and R2 are each independently selected from the group consisting of hydrogen, methyl, ethyl, and propyl.
The compound as recited in Claim 3 wherein W is -NRβ. The compound as recited in Claim 4 wherein m is I . The compound as recited in Claim 5 wherein G3 i3 optionally substituted aryl. The compound as recited in Claim 6 wherein said aryl is optionally substituted with one or more of the following: halogen, perhaloalkyl, and perhaloalkoxy. S. The compound as recited in Claim 7 wherein said aryl is substituted with perhaloalkoxy.
9. The compound as recited in Claim 8 wherein said perhaloalkoxy is trifhioromethoxy.
10. The compound as recited in Claim 9 wherein said trifluoromethoxy substitutes said aryl in the para position.
11. The compound as recited in Claim 3 wherein:
W is O; m is 0; and
G3 is optionally substituted ary).
12. The compound as recited in Claim 3 wherein:
W is O; m is 0; and
Gj is optionally substituted heteroaryl,
13. The compound as recited in Claim 3 wherein:
W is O;
46
PACE 49»S • RCVD AT 1/12/20077:21 :37 PM [Eastern Standard Time) • 8VR:USPT043FXRF-1/15 • DNI8:.7332O1 • C81D: • DURATION <tnm-ss):31-50 o: Theodosia SlmpWπs Page SO of S5 2007-01-1300:21:39 (GMT) From; LaVβm Hall
Attorney Docket No. K0091-401-PC
m is 0; and G3 Js -N=C(R7R8).
14. The compound as recited in Claim 13 wherein at least one of R.' and R8 is optionally substituted aryl.
15. The compound as recited in Claim I4 wherein both R7 and R8 are optionally substituted aryl.
16. The compound as recited in Claim 2 wherein:
A is optionally substituted phenyl;
R12 joins together with a carbon atom in G1 to form a five to eight-membered carbocycle or heterocycle;
R1 and R2 are each independently selected from the group consisting of hydrogen, methyl, ethyl, and propyl.
17. The compound as recited in Claim 16 having a structural Formula selected from the group consisting of:
Figure imgf000048_0001
wherein X' and X2 are each independently selected from the group consisting of hydrogen, halogen, hydroxy, optionally substituted lower alkyl, optionally substituted cycloaJkyl, optionally substituted heteroalkyl, optionally substituted cycloheteroalkyl, optionally substituted lower alkynyl, perhaloalkyl, perhaloalkoxy, optionally substituted lower alkoxy , nitro, cyano, and NH;.
18. The compound as recited in Claim 17 wherein:
W is O; m is O;
Xι and X2 and are each hydrogen; and
Gj is optionally substituted aryl.
19. The compound as recited in Claim 17 wherein:
W is O; m is O;
.Xi and Xj are each hydrogen; and
G3 is optionally substituted heteroαryl.
20. The compound as recited in Claim 17 wherein:
W is O; m is O;
X i and X2 are each hydrogen; and
G3 Is-N=C(R7R8).
47
PAGE 5M55 RCVD AT 1/12/20077:21 :37 PM [Eastern Standard Time] * 8VR:USPTO-EFXRF-1/15 < DNIβ:2733201 CGID: DURATION (mm-ss):31-50 o: Theodoεia Slmpkiπs Page 51 of 55 2007-01-1300:21:39 (GMT) From: LaVern Hall
Attorney Docket No. K.009I-401-PC
21. The compound as recited in Claim 20 wherein at least one of R7 and Ra is optionally substituted aryl.
22. The compound as recited in Claim 21 wherein both R.' and R8 are optionally substituted aryl.
23. The compound as recited in Claim 17 wherein:
W is N: m is 1 ;
X i and X2 are each hydrogen; and
G3 is optionally substituted aryl.
24. The compound as recited in Claim 16 having a structural Formula (V):
Figure imgf000049_0001
wherein X1 end X3 are each independently selected from the group consisting of hydrogen, halogen, hydroxy, optionally substituted lower alky I, optionally substituted cycloalkyl, optionally substituted heteroalkyl, optionally substituted cycloheteroalkyl, optionally substituted lower alkynyl, perhaloalkyl, perhaloalkoxy, optionally substituted lower aJkoxy, nitro, cyano, and NH2.
25. The compound as recited in Claim 24 wherein:
W is O; rn is O;
X1 and X2 are each hydrogen; and
G3 is optionally substituted aryl.
26. The compound as recited in Claim I, wherein said compound is selected from the group consisting of Examples 1-20.
27. The compound as recited in Claim 1 for use as a medicament.
28. The compound as recited in Claim I for use in the manufacture of a medicament for the prevention or treatment of a disease or condition ameliorated by the modulation of PPAR- delta.
29. A pharmaceutical composition comprising a compound as recited in Claim I , together with a pharmaceutically acceptable carrier.
30. A method for achieving on effect in a patient comprising the administration of α therapeutically effective amount of a therapeutically effective amount of a compound of Formula I:
48
PACE 51«5 • HOVD AT 1/12/20077:21:3/ PM [Eastern Standard Time] • 8VR:USPTO-EFXRF-1/15 • DNIS:2ra3201 " CBlD: " DURATION <mm-ss):31-50 o: Theαdosia Simpkins Page 52 of 55 2007-01-1300:21:39 (GMT) From: LaVβrn Hall
Attorney Docket No. K.0091-401 -PC
Figure imgf000050_0001
wherein:
A is selected from the group consisting ofaryl, heteroaryl, cycloalkyl, and heterocycloaikyl, any of which may be optionally substituted;
R12 is selected from the group consisting of hydrogen, lower alkyl, lower alkenyl, lower heteroalkyl, and lower alkoxy; R12 may join together with a carbon atom in G1 to form a five to eight-membered carbocycle or heterocycle, having structural Formula (H):
Figure imgf000050_0002
B is a saturated, partially saturated, or unsaturated hydrocarbon chain, optionally containing one or more heteroatoms, to form on optionally substituted five- to eight- membered cβrbocycle or heterocycle;
T is selected from the group consisting Of-C(O)OH, -C(O)NH2, and tetrazole;
G1 is selected from the group consisting of -(GR1R2),,- , -Z(CR1R2V-, -(CR1 R2),Z-, - (CR1 R2),Z(CR' R2Js-;
Z is O, S, or N R6; n is 1 to 4; r and s are 0 to 2;
R' and R2 are each independently selected from the group consisting of hydrogen, halogen, lower alkyU loweralkoxy, and lower perhaloalkyl, or R' and R2together may form a cycloftlkyl;
G2 is -Y(CR-1If)P W(CR3R *)m -;
Y is S, -SO2N(R5)- or NR6;
W is O, S or -NR"; p is 2 to 6; m is 0, 1 or 2;
R3 and K* are each independently selected from the group consisting of hydrogen, halogen, hydroxy, optionally substituted lower alkyl, optionally substituted lower alkoxy, optionally substituted heteroalkyl, optionally substituted cycloalkyl, lowerperhaloalkyl, lower perhaloalkoxy, nitro, cyano, NHj, and -C(O)OR", or R'1 and R4 together may form a cycloftlkyl;
R1 ' is selected from the group consisting of hydrogen and optionally substituted lower alkyl;
49
PACE 52/55 • RCVD AT 1/12/20077:21:37 PM [Eastern Standard Time] • 8VR:USPT0-EFXRF-1f1S • DNIB:2733201 • CSID: ' DURATION <mm-ss):31-50 o: Theodoaa SimpMns Page S3 of 55 2007-01-1300:21:39 (GMT) From: LaVβm Hall
Attorney Docket No. K0091-401 -PC
R5 and R" are each independently selected from the group consisting of hydrogen, optionally substituted lower alkyl, optionally substituted lower alkenyl, optionally substituted lower alkynyl, optionally substituted heteroalkyl, optionally substituted aryl, and optionally substituted heteroaryl;
G3 is selected from the group consisting of hydrogen, optionally substituted aryl, optionally substituted heteroaryl, optionally substituted cycloalkyl, optionally substituted cyclohetβroalkyl, and -N=C(R7R8);
R7 and Rβ are each individually selected from the group consisting of hydrogen, optionally substituted aryl, optionally substituted heteroaryl, optionally substituted cycloalkyl, and optionally substituted cyclobeteroalkyl; and wherein said effect is selected from the group consisting of modulation of PPAR5, upregulation of expression of GLUT4 in adipose tissue, reduction of expression of NPCl Ll , raising of HDL, lowering of LDLc, shifting of LDL particle size from small dense to normal LDL, inhibition of cholesterol absorption, reduction of triglycerides, decrease of insulin resistance, lowering of blood pressure, promotion of wound healing , reduction of scaning, and treatment of a PPARδ-mediated disease.
31. The method as recited in Claim 30 wherein said PPARδ-medialed disease is selected from the group consisting of obesity, diabetes, hyperinsulinemia, metabolic syndrome X, dyslipidemia, hypercholesterolemia, cardiovascular disease, vascular disease, atherosclerosis, coronary heart disease, cerebrovascular disease, heart failure, peripheral vessel disease, hyperproliferative disorders, cancers, inflammatory diseases, asthma, rheumatoid arthritis, osteoarthritis, disorders associated with oxidative stress, inflammatory response to tissue injury, psoriasis, ulcerative colitis, dermatitis, autoimmune disease, ophthalmologic diseases, dry eye, macular degeneration, closed angle glaucoma, wide angle glaucoma, inflammation of the eye, and pain of the eye.
50
PACE 53/55 • RCVD AT 1/12720077:21 :37 PM [Eastern Standard Time] * 8VR:UβPT0-EFXRF-1/1 S • DNIβ:2733201 C8ID: • DURATION (mm-ss):31-50
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US7915253B2 (en) 2004-10-29 2011-03-29 Kalypsys, Inc Sulfonyl-substituted bicyclic compounds as modulators of PPAR
WO2012030165A2 (en) 2010-08-31 2012-03-08 서울대학교산학협력단 Use of the fetal reprogramming of a ppar δ agonist
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US7915253B2 (en) 2004-10-29 2011-03-29 Kalypsys, Inc Sulfonyl-substituted bicyclic compounds as modulators of PPAR
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